(14 nodes) General transcription initiation factor binding network (Penicillium antarcticum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PTW9	Uncharacterized protein. (683 aa)
	A0A1V6PUY6	TFIID_20kDa domain-containing protein. (621 aa)
	A0A1V6PZ45	Uncharacterized protein. (449 aa)
	A0A1V6Q210	DUF3591 domain-containing protein. (1373 aa)
	A0A1V6Q5L7	Uncharacterized protein. (1905 aa)
	A0A1V6Q5M8	Uncharacterized protein. (966 aa)
	A0A1V6QAQ4	SANT domain-containing protein. (632 aa)
	A0A1V6QDA2	TFIIB-type domain-containing protein. (350 aa)
	A0A1V6QGS9	Uncharacterized protein. (653 aa)
	A0A1V6QL59	Uncharacterized protein. (724 aa)
	A0A1V6QN00	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	A0A1V6QNM9	Uncharacterized protein. (353 aa)
	A0A1V6QP95	TIP120 domain-containing protein. (1036 aa)
	A0A1V6QNN1	Uncharacterized protein. (304 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PTW9	A0A1V6PUY6	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.909
A0A1V6PTW9	A0A1V6Q210	Uncharacterized protein.	DUF3591 domain-containing protein.	0.970
A0A1V6PTW9	A0A1V6QDA2	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.992
A0A1V6PTW9	A0A1V6QN00	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.973
A0A1V6PTW9	A0A1V6QNM9	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A1V6PUY6	A0A1V6PTW9	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.909
A0A1V6PUY6	A0A1V6Q210	TFIID_20kDa domain-containing protein.	DUF3591 domain-containing protein.	0.999
A0A1V6PUY6	A0A1V6Q5L7	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.592
A0A1V6PUY6	A0A1V6Q5M8	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.438
A0A1V6PUY6	A0A1V6QDA2	TFIID_20kDa domain-containing protein.	TFIIB-type domain-containing protein.	0.948
A0A1V6PUY6	A0A1V6QGS9	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.858
A0A1V6PUY6	A0A1V6QN00	TFIID_20kDa domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.883
A0A1V6PUY6	A0A1V6QNM9	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.883
A0A1V6PZ45	A0A1V6Q5M8	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1V6PZ45	A0A1V6QL59	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A1V6Q210	A0A1V6PTW9	DUF3591 domain-containing protein.	Uncharacterized protein.	0.970
A0A1V6Q210	A0A1V6PUY6	DUF3591 domain-containing protein.	TFIID_20kDa domain-containing protein.	0.999
A0A1V6Q210	A0A1V6Q5L7	DUF3591 domain-containing protein.	Uncharacterized protein.	0.529
A0A1V6Q210	A0A1V6QAQ4	DUF3591 domain-containing protein.	SANT domain-containing protein.	0.463
A0A1V6Q210	A0A1V6QDA2	DUF3591 domain-containing protein.	TFIIB-type domain-containing protein.	0.981