14 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PZ84	CRAL-TRIO domain-containing protein. (482 aa)
	A0A1V6PZG2	CRAL-TRIO domain-containing protein. (537 aa)
	A0A1V6Q1M5	t-SNARE coiled-coil homology domain-containing protein. (326 aa)
	A0A1V6Q453	Uncharacterized protein. (267 aa)
	A0A1V6Q5S3	CRAL-TRIO domain-containing protein. (1006 aa)
	A0A1V6Q697	Uncharacterized protein. (715 aa)
	A0A1V6Q8X7	Peroxin/Ferlin domain-containing protein. (1338 aa)
	A0A1V6Q9L3	Uncharacterized protein. (331 aa)
	A0A1V6QA14	CRAL-TRIO domain-containing protein. (334 aa)
	A0A1V6QHI8	Phospholipase. (1791 aa)
	A0A1V6QJY2	PH domain-containing protein. (1129 aa)
	A0A1V6QMC1	Uncharacterized protein. (1375 aa)
	A0A1V6QN34	Uncharacterized protein. (409 aa)
	A0A1V6QPJ7	Phospholipase. (1207 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PZ84	A0A1V6QA14	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6PZG2	A0A1V6QA14	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6Q5S3	A0A1V6QA14	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6Q8X7	A0A1V6QJY2	Peroxin/Ferlin domain-containing protein.	PH domain-containing protein.	0.505
A0A1V6QA14	A0A1V6PZ84	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6QA14	A0A1V6PZG2	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6QA14	A0A1V6Q5S3	CRAL-TRIO domain-containing protein.	CRAL-TRIO domain-containing protein.	0.518
A0A1V6QA14	A0A1V6QHI8	CRAL-TRIO domain-containing protein.	Phospholipase.	0.714
A0A1V6QA14	A0A1V6QPJ7	CRAL-TRIO domain-containing protein.	Phospholipase.	0.629
A0A1V6QHI8	A0A1V6QA14	Phospholipase.	CRAL-TRIO domain-containing protein.	0.714
A0A1V6QHI8	A0A1V6QPJ7	Phospholipase.	Phospholipase.	0.893
A0A1V6QJY2	A0A1V6Q8X7	PH domain-containing protein.	Peroxin/Ferlin domain-containing protein.	0.505
A0A1V6QPJ7	A0A1V6QA14	Phospholipase.	CRAL-TRIO domain-containing protein.	0.629
A0A1V6QPJ7	A0A1V6QHI8	Phospholipase.	Phospholipase.	0.893