11 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PTW6	ANK_REP_REGION domain-containing protein. (815 aa)
	A0A1V6Q3C1	Uncharacterized protein. (198 aa)
	A0A1V6QNM6	DUF676 domain-containing protein. (1148 aa)
	A0A1V6QNU3	Uncharacterized protein. (212 aa)
	A0A1V6Q3H8	Uncharacterized protein. (883 aa)
	A0A1V6Q9W1	Uncharacterized protein. (213 aa)
	A0A1V6QGG7	Uncharacterized protein. (175 aa)
	A0A1V6QHZ2	Uncharacterized protein. (267 aa)
	A0A1V6QIQ1	Uncharacterized protein. (307 aa)
	A0A1V6PGU4	Uncharacterized protein. (229 aa)
	A0A1V6QKF2	NB-ARC domain-containing protein. (1491 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PGU4	A0A1V6Q3C1	Uncharacterized protein.	Uncharacterized protein.	0.885
A0A1V6PGU4	A0A1V6Q3H8	Uncharacterized protein.	Uncharacterized protein.	0.936
A0A1V6PGU4	A0A1V6QIQ1	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A1V6PGU4	A0A1V6QNU3	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A1V6Q3C1	A0A1V6PGU4	Uncharacterized protein.	Uncharacterized protein.	0.885
A0A1V6Q3C1	A0A1V6Q3H8	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6Q3C1	A0A1V6Q9W1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A1V6Q3C1	A0A1V6QGG7	Uncharacterized protein.	Uncharacterized protein.	0.909
A0A1V6Q3C1	A0A1V6QHZ2	Uncharacterized protein.	Uncharacterized protein.	0.885
A0A1V6Q3C1	A0A1V6QIQ1	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6Q3C1	A0A1V6QNU3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6Q3H8	A0A1V6PGU4	Uncharacterized protein.	Uncharacterized protein.	0.936
A0A1V6Q3H8	A0A1V6Q3C1	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6Q3H8	A0A1V6Q9W1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6Q3H8	A0A1V6QGG7	Uncharacterized protein.	Uncharacterized protein.	0.922
A0A1V6Q3H8	A0A1V6QHZ2	Uncharacterized protein.	Uncharacterized protein.	0.936
A0A1V6Q3H8	A0A1V6QIQ1	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1V6Q3H8	A0A1V6QNU3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6Q9W1	A0A1V6Q3C1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A1V6Q9W1	A0A1V6Q3H8	Uncharacterized protein.	Uncharacterized protein.	0.999