9 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q1T0	Uncharacterized protein. (347 aa)
	A0A1V6PV64	Uncharacterized protein. (2066 aa)
	A0A1V6PS72	Uncharacterized protein. (674 aa)
	A0A1V6QL90	UBIQUITIN_CONJUGAT_2 domain-containing protein. (619 aa)
	A0A1V6QH95	ANK_REP_REGION domain-containing protein. (908 aa)
	A0A1V6QG85	Uncharacterized protein. (771 aa)
	A0A1V6Q7B5	DOC domain-containing protein. (969 aa)
	A0A1V6Q5X6	CULLIN_2 domain-containing protein; Belongs to the cullin family. (891 aa)
	A0A1V6Q2K1	RING-type domain-containing protein. (88 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS72	A0A1V6PV64	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS72	A0A1V6Q1T0	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6PS72	A0A1V6Q2K1	Uncharacterized protein.	RING-type domain-containing protein.	0.998
A0A1V6PS72	A0A1V6Q5X6	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
A0A1V6PS72	A0A1V6Q7B5	Uncharacterized protein.	DOC domain-containing protein.	0.999
A0A1V6PS72	A0A1V6QG85	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PS72	A0A1V6QL90	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.997
A0A1V6PV64	A0A1V6PS72	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PV64	A0A1V6Q1T0	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6PV64	A0A1V6Q2K1	Uncharacterized protein.	RING-type domain-containing protein.	0.998
A0A1V6PV64	A0A1V6Q5X6	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
A0A1V6PV64	A0A1V6Q7B5	Uncharacterized protein.	DOC domain-containing protein.	0.999
A0A1V6PV64	A0A1V6QG85	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6PV64	A0A1V6QL90	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.993
A0A1V6Q1T0	A0A1V6PS72	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6Q1T0	A0A1V6PV64	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6Q1T0	A0A1V6Q5X6	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.978
A0A1V6Q1T0	A0A1V6Q7B5	Uncharacterized protein.	DOC domain-containing protein.	0.978
A0A1V6Q1T0	A0A1V6QG85	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1V6Q1T0	A0A1V6QL90	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.964