10 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q450	Uncharacterized protein. (238 aa)
	A0A1V6PT48	Uncharacterized protein. (252 aa)
	A0A1V6PUA9	Uncharacterized protein. (210 aa)
	A0A1V6PYQ0	Uncharacterized protein. (259 aa)
	A0A1V6Q0Z3	Uncharacterized protein. (239 aa)
	A0A1V6Q7C1	Uncharacterized protein. (236 aa)
	A0A1V6QAR1	Uncharacterized protein. (230 aa)
	A0A1V6QJU2	Uncharacterized protein. (237 aa)
	A0A1V6QMZ1	Uncharacterized protein. (275 aa)
	A0A1V6QP27	Uncharacterized protein. (263 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PT48	A0A1V6Q0Z3	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1V6PUA9	A0A1V6Q450	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A1V6PUA9	A0A1V6QP27	Uncharacterized protein.	Uncharacterized protein.	0.859
A0A1V6Q0Z3	A0A1V6PT48	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1V6Q0Z3	A0A1V6QMZ1	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A1V6Q450	A0A1V6PUA9	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A1V6Q450	A0A1V6Q7C1	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A1V6Q450	A0A1V6QP27	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A1V6Q7C1	A0A1V6Q450	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A1V6QMZ1	A0A1V6Q0Z3	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A1V6QP27	A0A1V6PUA9	Uncharacterized protein.	Uncharacterized protein.	0.859
A0A1V6QP27	A0A1V6Q450	Uncharacterized protein.	Uncharacterized protein.	0.893