6 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PV65	Uncharacterized protein; Belongs to the complex I LYR family. (112 aa)
	A0A1V6Q443	Uncharacterized protein; Belongs to the complex I LYR family. (78 aa)
	A0A1V6Q9Y0	Uncharacterized protein. (123 aa)
	A0A1V6QHV2	Uncharacterized protein; Belongs to the complex I LYR family. (99 aa)
	A0A1V6QL49	Uncharacterized protein. (115 aa)
	A0A1V6QP01	Uncharacterized protein. (118 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PV65	A0A1V6Q443	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein; Belongs to the complex I LYR family.	0.498
A0A1V6PV65	A0A1V6QP01	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.444
A0A1V6Q443	A0A1V6PV65	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein; Belongs to the complex I LYR family.	0.498
A0A1V6Q443	A0A1V6QL49	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.450
A0A1V6Q9Y0	A0A1V6QHV2	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A1V6QHV2	A0A1V6Q9Y0	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
A0A1V6QL49	A0A1V6Q443	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.450
A0A1V6QP01	A0A1V6PV65	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.444