50 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q0V8	Uncharacterized protein. (612 aa)
	A0A1V6Q6K1	Uncharacterized protein; Belongs to the DEAD box helicase family. (680 aa)
	A0A1V6Q603	Uncharacterized protein. (933 aa)
	A0A1V6Q5A2	Uncharacterized protein. (936 aa)
	A0A1V6Q3Y9	Uncharacterized protein; Belongs to the DEAD box helicase family. (482 aa)
	A0A1V6Q3F7	Uncharacterized protein. (442 aa)
	A0A1V6Q2U4	Uncharacterized protein. (1488 aa)
	A0A1V6Q806	Uncharacterized protein. (1074 aa)
	A0A1V6Q885	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (497 aa)
	A0A1V6Q8F5	Uncharacterized protein; Belongs to the DEAD box helicase family. (754 aa)
	A0A1V6QPA8	Uncharacterized protein. (1124 aa)
	A0A1V6QPD1	ATP-dependent RNA helicase DBP10. (916 aa)
	A0A1V6QPN9	Uncharacterized protein. (1449 aa)
	A0A1V6QPP4	Uncharacterized protein. (1343 aa)
	A0A1V6QQE4	Uncharacterized protein. (634 aa)
	A0A1V6Q2A3	Uncharacterized protein; Belongs to the DEAD box helicase family. (587 aa)
	A0A1V6Q292	Uncharacterized protein; Belongs to the DEAD box helicase family. (482 aa)
	A0A1V6Q0I5	Uncharacterized protein. (1195 aa)
	A0A1V6Q7M0	Uncharacterized protein; Belongs to the DEAD box helicase family. (678 aa)
	A0A1V6QJT9	Uncharacterized protein. (1992 aa)
	A0A1V6QI18	Uncharacterized protein. (2204 aa)
	A0A1V6QHR4	Uncharacterized protein; Belongs to the DEAD box helicase family. (512 aa)
	A0A1V6QAI1	Uncharacterized protein. (1208 aa)
	A0A1V6QKR5	RNA helicase. (635 aa)
	A0A1V6QLA5	Uncharacterized protein; Belongs to the DEAD box helicase family. (523 aa)
	A0A1V6QNL4	RNA helicase. (607 aa)
	A0A1V6QP64	RNA helicase. (810 aa)
	A0A1V6QJV1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1350 aa)
	A0A1V6P0Q2	Uncharacterized protein. (1167 aa)
	A0A1V6PEF2	Uncharacterized protein. (399 aa)
	A0A1V6PEQ4	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1709 aa)
	A0A1V6PJ57	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1314 aa)
	A0A1V6PJC0	Uncharacterized protein. (408 aa)
	A0A1V6PJX0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1280 aa)
	A0A1V6PQD5	Uncharacterized protein. (1176 aa)
	A0A1V6PS55	Uncharacterized protein; Belongs to the DEAD box helicase family. (496 aa)
	A0A1V6PSB8	Uncharacterized protein; Belongs to the DEAD box helicase family. (399 aa)
	A0A1V6PSJ0	Uncharacterized protein. (803 aa)
	A0A1V6PTZ0	Uncharacterized protein. (567 aa)
	A0A1V6PV04	Uncharacterized protein; Belongs to the DEAD box helicase family. (396 aa)
	A0A1V6PVG8	Uncharacterized protein; Belongs to the DEAD box helicase family. (764 aa)
	A0A1V6PW53	Uncharacterized protein; Belongs to the DEAD box helicase family. (795 aa)
	A0A1V6PW92	Uncharacterized protein. (1845 aa)
	A0A1V6PWL3	Uncharacterized protein. (758 aa)
	A0A1V6PXL5	Uncharacterized protein. (2043 aa)
	A0A1V6PXT5	Uncharacterized protein; Belongs to the DEAD box helicase family. (572 aa)
	A0A1V6PYL4	Uncharacterized protein. (1077 aa)
	A0A1V6PZ05	Uncharacterized protein. (713 aa)
	A0A1V6PZ12	Uncharacterized protein. (1018 aa)
	A0A1V6Q068	Uncharacterized protein. (1911 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PEF2	A0A1V6QP64	Uncharacterized protein.	RNA helicase.	0.402
A0A1V6PEQ4	A0A1V6PQD5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PEQ4	A0A1V6PVG8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.594
A0A1V6PEQ4	A0A1V6Q0V8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PEQ4	A0A1V6QP64	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	RNA helicase.	0.402
A0A1V6PJ57	A0A1V6PQD5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PJ57	A0A1V6PVG8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.594
A0A1V6PJ57	A0A1V6Q0V8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PJ57	A0A1V6QP64	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	RNA helicase.	0.402
A0A1V6PJC0	A0A1V6QP64	Uncharacterized protein.	RNA helicase.	0.402
A0A1V6PJX0	A0A1V6PQD5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PJX0	A0A1V6PVG8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.594
A0A1V6PJX0	A0A1V6Q0V8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.594
A0A1V6PJX0	A0A1V6QP64	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	RNA helicase.	0.402
A0A1V6PQD5	A0A1V6PEQ4	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.594
A0A1V6PQD5	A0A1V6PJ57	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.594
A0A1V6PQD5	A0A1V6PJX0	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.594
A0A1V6PQD5	A0A1V6PVG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.427
A0A1V6PQD5	A0A1V6PW53	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.475
A0A1V6PQD5	A0A1V6PW92	Uncharacterized protein.	Uncharacterized protein.	0.484