8 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q381	Uncharacterized protein. (315 aa)
	A0A1V6QK70	Uncharacterized protein. (280 aa)
	A0A1V6PZ90	Uncharacterized protein. (173 aa)
	A0A1V6PXV7	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (293 aa)
	A0A1V6PXR5	Uncharacterized protein. (295 aa)
	A0A1V6QPE9	Uncharacterized protein. (289 aa)
	A0A1V6QLC4	Uncharacterized protein. (306 aa)
	A0A1V6PXN8	Uncharacterized protein. (272 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PXN8	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A1V6PXR5	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.702
A0A1V6PXV7	A0A1V6QK70	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.699
A0A1V6PZ90	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.647
A0A1V6Q381	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.698
A0A1V6QK70	A0A1V6PXN8	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A1V6QK70	A0A1V6PXR5	Uncharacterized protein.	Uncharacterized protein.	0.702
A0A1V6QK70	A0A1V6PXV7	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.699
A0A1V6QK70	A0A1V6PZ90	Uncharacterized protein.	Uncharacterized protein.	0.647
A0A1V6QK70	A0A1V6Q381	Uncharacterized protein.	Uncharacterized protein.	0.698
A0A1V6QK70	A0A1V6QLC4	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A1V6QK70	A0A1V6QPE9	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A1V6QLC4	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A1V6QPE9	A0A1V6QK70	Uncharacterized protein.	Uncharacterized protein.	0.696