5 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QAX0	PUM-HD domain-containing protein. (897 aa)
	A0A1V6Q3S1	PUM-HD domain-containing protein. (1104 aa)
	A0A1V6PT99	PUM-HD domain-containing protein. (822 aa)
	A0A1V6Q5P7	Uncharacterized protein. (1164 aa)
	A0A1V6QLB9	PUM-HD domain-containing protein. (695 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PT99	A0A1V6Q3S1	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.443
A0A1V6PT99	A0A1V6QLB9	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.501
A0A1V6Q3S1	A0A1V6PT99	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.443
A0A1V6Q3S1	A0A1V6QAX0	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.467
A0A1V6Q3S1	A0A1V6QLB9	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.634
A0A1V6Q5P7	A0A1V6QLB9	Uncharacterized protein.	PUM-HD domain-containing protein.	0.453
A0A1V6QAX0	A0A1V6Q3S1	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.467
A0A1V6QAX0	A0A1V6QLB9	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.573
A0A1V6QLB9	A0A1V6PT99	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.501
A0A1V6QLB9	A0A1V6Q3S1	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.634
A0A1V6QLB9	A0A1V6Q5P7	PUM-HD domain-containing protein.	Uncharacterized protein.	0.453
A0A1V6QLB9	A0A1V6QAX0	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.573