10 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QNX4	Uncharacterized protein. (1078 aa)
	A0A1V6QMN4	Uncharacterized protein. (1424 aa)
	A0A1V6PS58	Uncharacterized protein. (248 aa)
	A0A1V6PSX4	Uncharacterized protein. (593 aa)
	A0A1V6PZB0	Uncharacterized protein. (272 aa)
	A0A1V6Q759	Uncharacterized protein. (709 aa)
	A0A1V6QCP7	Hist_deacetyl domain-containing protein. (639 aa)
	A0A1V6QGU1	WD_REPEATS_REGION domain-containing protein. (443 aa)
	A0A1V6QKP5	ARID domain-containing protein. (973 aa)
	A0A1V6QM31	Uncharacterized protein. (498 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PS58	A0A1V6PZB0	Uncharacterized protein.	Uncharacterized protein.	0.778
A0A1V6PS58	A0A1V6QCP7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.885
A0A1V6PS58	A0A1V6QGU1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.938
A0A1V6PS58	A0A1V6QKP5	Uncharacterized protein.	ARID domain-containing protein.	0.512
A0A1V6PS58	A0A1V6QM31	Uncharacterized protein.	Uncharacterized protein.	0.694
A0A1V6PS58	A0A1V6QNX4	Uncharacterized protein.	Uncharacterized protein.	0.615
A0A1V6PSX4	A0A1V6QCP7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.654
A0A1V6PSX4	A0A1V6QGU1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.733
A0A1V6PSX4	A0A1V6QM31	Uncharacterized protein.	Uncharacterized protein.	0.757
A0A1V6PZB0	A0A1V6PS58	Uncharacterized protein.	Uncharacterized protein.	0.778
A0A1V6PZB0	A0A1V6QCP7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.845
A0A1V6PZB0	A0A1V6QGU1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.987
A0A1V6PZB0	A0A1V6QKP5	Uncharacterized protein.	ARID domain-containing protein.	0.669
A0A1V6PZB0	A0A1V6QM31	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A1V6PZB0	A0A1V6QMN4	Uncharacterized protein.	Uncharacterized protein.	0.803
A0A1V6PZB0	A0A1V6QNX4	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A1V6Q759	A0A1V6QCP7	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.869
A0A1V6Q759	A0A1V6QGU1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.734
A0A1V6Q759	A0A1V6QKP5	Uncharacterized protein.	ARID domain-containing protein.	0.667
A0A1V6QCP7	A0A1V6PS58	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.885