30 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QG96	Protein-serine/threonine kinase. (435 aa)
	A0A1V6PP94	Uncharacterized protein. (330 aa)
	A0A1V6PPA9	Aldedh domain-containing protein. (500 aa)
	A0A1V6QPE9	Uncharacterized protein. (289 aa)
	A0A1V6PR16	Uncharacterized protein. (351 aa)
	A0A1V6PRF8	Uncharacterized protein. (292 aa)
	A0A1V6PTZ1	Uncharacterized protein. (411 aa)
	A0A1V6PUL9	Uncharacterized protein. (581 aa)
	A0A1V6PVI9	2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (449 aa)
	A0A1V6PXC1	Uncharacterized protein. (274 aa)
	A0A1V6PXN8	Uncharacterized protein. (272 aa)
	A0A1V6PXR5	Uncharacterized protein. (295 aa)
	A0A1V6PXV7	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (293 aa)
	A0A1V6PY93	Uncharacterized protein. (1002 aa)
	A0A1V6PYD1	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (397 aa)
	A0A1V6PZ90	Uncharacterized protein. (173 aa)
	A0A1V6Q0P4	Uncharacterized protein. (266 aa)
	A0A1V6Q0Y7	Protein-serine/threonine kinase. (453 aa)
	A0A1V6Q2H0	Transket_pyr domain-containing protein. (387 aa)
	A0A1V6Q381	Uncharacterized protein. (315 aa)
	A0A1V6Q3G2	Uncharacterized protein. (397 aa)
	A0A1V6Q3I0	Uncharacterized protein. (374 aa)
	A0A1V6Q3U0	Uncharacterized protein. (311 aa)
	A0A1V6Q7Y9	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
	A0A1V6QNJ9	Aldedh domain-containing protein. (588 aa)
	A0A1V6QN72	Uncharacterized protein. (359 aa)
	A0A1V6QMU2	Uncharacterized protein. (328 aa)
	A0A1V6QLC4	Uncharacterized protein. (306 aa)
	A0A1V6QBY9	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (470 aa)
	A0A1V6QEM9	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (474 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PP94	A0A1V6PPA9	Uncharacterized protein.	Aldedh domain-containing protein.	0.868
A0A1V6PP94	A0A1V6PUL9	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A1V6PP94	A0A1V6PXC1	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6PXN8	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6PXR5	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6PXV7	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.659
A0A1V6PP94	A0A1V6PY93	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6PZ90	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A1V6PP94	A0A1V6Q0P4	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6Q381	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PP94	A0A1V6QBY9	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.974
A0A1V6PP94	A0A1V6QEM9	Uncharacterized protein.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.692
A0A1V6PP94	A0A1V6QLC4	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A1V6PP94	A0A1V6QNJ9	Uncharacterized protein.	Aldedh domain-containing protein.	0.868
A0A1V6PP94	A0A1V6QPE9	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1V6PPA9	A0A1V6PP94	Aldedh domain-containing protein.	Uncharacterized protein.	0.868
A0A1V6PPA9	A0A1V6PRF8	Aldedh domain-containing protein.	Uncharacterized protein.	0.673
A0A1V6PPA9	A0A1V6PTZ1	Aldedh domain-containing protein.	Uncharacterized protein.	0.459
A0A1V6PPA9	A0A1V6PUL9	Aldedh domain-containing protein.	Uncharacterized protein.	0.719
A0A1V6PPA9	A0A1V6PXC1	Aldedh domain-containing protein.	Uncharacterized protein.	0.620