23 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6PR65	CPSF_A domain-containing protein. (1390 aa)
	A0A1V6PXM4	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	A0A1V6QMP4	Fip1 domain-containing protein. (333 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (869 aa)
	A0A1V6QIF1	Small nuclear ribonucleoprotein G. (77 aa)
	A0A1V6QAU9	Uncharacterized protein. (819 aa)
	A0A1V6PUR9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
	A0A1V6QN88	WD_REPEATS_REGION domain-containing protein. (607 aa)
	A0A1V6QMR9	RRM domain-containing protein. (291 aa)
	A0A1V6PUA8	Uncharacterized protein. (614 aa)
	A0A1V6PS24	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (268 aa)
	A0A1V6PS04	Uncharacterized protein. (601 aa)
	A0A1V6QNZ5	Nuclear cap-binding protein subunit 2. (175 aa)
	A0A1V6QA74	TPR_REGION domain-containing protein. (1002 aa)
	A0A1V6QA20	Cleavage and polyadenylation specificity factor subunit 2. (997 aa)
	A0A1V6Q7A5	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (593 aa)
	A0A1V6Q6P2	DUF3453 domain-containing protein. (744 aa)
	A0A1V6Q6N6	Sm domain-containing protein. (374 aa)
	A0A1V6Q5Z2	RRM domain-containing protein. (190 aa)
	A0A1V6Q1K4	Uncharacterized protein. (259 aa)
	A0A1V6Q085	Sm domain-containing protein. (211 aa)
	A0A1V6PZE6	Uncharacterized protein. (254 aa)
	A0A1V6PZ73	Uncharacterized protein. (854 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1V6PR65	A0A1V6PS04	A0A1V6PR65	A0A1V6PS04	CPSF_A domain-containing protein.	Uncharacterized protein.	0.949
A0A1V6PR65	A0A1V6PS24	A0A1V6PR65	A0A1V6PS24	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.825
A0A1V6PR65	A0A1V6PUA8	A0A1V6PR65	A0A1V6PUA8	CPSF_A domain-containing protein.	Uncharacterized protein.	0.988
A0A1V6PR65	A0A1V6PZ73	A0A1V6PR65	A0A1V6PZ73	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PR65	A0A1V6PZE6	A0A1V6PR65	A0A1V6PZE6	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
A0A1V6PR65	A0A1V6Q5Z2	A0A1V6PR65	A0A1V6Q5Z2	CPSF_A domain-containing protein.	RRM domain-containing protein.	0.758
A0A1V6PR65	A0A1V6Q6P2	A0A1V6PR65	A0A1V6Q6P2	CPSF_A domain-containing protein.	DUF3453 domain-containing protein.	0.999
A0A1V6PR65	A0A1V6Q7A5	A0A1V6PR65	A0A1V6Q7A5	CPSF_A domain-containing protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.994
A0A1V6PR65	A0A1V6QA20	A0A1V6PR65	A0A1V6QA20	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
A0A1V6PR65	A0A1V6QA74	A0A1V6PR65	A0A1V6QA74	CPSF_A domain-containing protein.	TPR_REGION domain-containing protein.	0.987
A0A1V6PR65	A0A1V6QAU9	A0A1V6PR65	A0A1V6QAU9	CPSF_A domain-containing protein.	Uncharacterized protein.	0.842
A0A1V6PR65	A0A1V6QMP4	A0A1V6PR65	A0A1V6QMP4	CPSF_A domain-containing protein.	Fip1 domain-containing protein.	0.998
A0A1V6PR65	A0A1V6QMR9	A0A1V6PR65	A0A1V6QMR9	CPSF_A domain-containing protein.	RRM domain-containing protein.	0.989
A0A1V6PR65	A0A1V6QN88	A0A1V6PR65	A0A1V6QN88	CPSF_A domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1V6PR65	A0A1V6QNZ5	A0A1V6PR65	A0A1V6QNZ5	CPSF_A domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.669
A0A1V6PR65	CLP1	A0A1V6PR65	A0A1V6PWR9	CPSF_A domain-containing protein.	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	0.901
A0A1V6PS04	A0A1V6PR65	A0A1V6PS04	A0A1V6PR65	Uncharacterized protein.	CPSF_A domain-containing protein.	0.949
A0A1V6PS04	A0A1V6PS24	A0A1V6PS04	A0A1V6PS24	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.821
A0A1V6PS04	A0A1V6PUA8	A0A1V6PS04	A0A1V6PUA8	Uncharacterized protein.	Uncharacterized protein.	0.937
A0A1V6PS04	A0A1V6PUR9	A0A1V6PS04	A0A1V6PUR9	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.857