(32 nodes) Glycosaminoglycan degradation network (Penicillium antarcticum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q4S4	BetaGal_dom2 domain-containing protein. (980 aa)
	A0A1V6Q0X6	Uncharacterized protein. (868 aa)
	A0A1V6Q012	Arylsulfatase; Belongs to the sulfatase family. (577 aa)
	A0A1V6PZX1	Uncharacterized protein. (585 aa)
	A0A1V6PZJ0	Uncharacterized protein. (509 aa)
	A0A1V6PZE3	BetaGal_dom2 domain-containing protein. (1013 aa)
	A0A1V6PY79	Uncharacterized protein. (703 aa)
	A0A1V6PWH8	Uncharacterized protein. (644 aa)
	A0A1V6PT09	Arylsulfatase; Belongs to the sulfatase family. (585 aa)
	A0A1V6PRE9	Glyco_hydro_3 domain-containing protein. (948 aa)
	A0A1V6PP67	Uncharacterized protein. (580 aa)
	A0A1V6QAJ1	Uncharacterized protein. (343 aa)
	A0A1V6Q9D2	Uncharacterized protein. (1007 aa)
	A0A1V6Q904	Uncharacterized protein. (566 aa)
	A0A1V6Q7Z8	Uncharacterized protein. (395 aa)
	A0A1V6Q3I5	Uncharacterized protein. (131 aa)
	A0A1V6QMH8	Sulfatase domain-containing protein. (489 aa)
	A0A1V6QMH3	Uncharacterized protein. (789 aa)
	A0A1V6QLH4	N-acetyltransferase domain-containing protein. (809 aa)
	A0A1V6QJY4	Uncharacterized protein. (752 aa)
	A0A1V6QIY3	Beta-hexosaminidase. (594 aa)
	A0A1V6QI78	Uncharacterized protein. (171 aa)
	A0A1V6QI17	Glyco_hydro_3 domain-containing protein. (358 aa)
	A0A1V6QHK8	F-box domain-containing protein. (561 aa)
	A0A1V6QGU7	Uncharacterized protein. (737 aa)
	A0A1V6QCN6	BetaGal_dom4_5 domain-containing protein. (106 aa)
	A0A1V6QCK0	Uncharacterized protein. (672 aa)
	A0A1V6QCF8	Beta-galactosidase. (830 aa)
	A0A1V6QCF2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (319 aa)
	A0A1V6QBY6	Sulfatase domain-containing protein. (619 aa)
	A0A1V6QBV7	Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family. (634 aa)
	A0A1V6QBH3	Uncharacterized protein. (565 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PP67	A0A1V6PWH8	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6PP67	A0A1V6Q0X6	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A1V6PP67	A0A1V6QBV7	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family.	0.621
A0A1V6PP67	A0A1V6QIY3	Uncharacterized protein.	Beta-hexosaminidase.	0.589
A0A1V6PRE9	A0A1V6QIY3	Glyco_hydro_3 domain-containing protein.	Beta-hexosaminidase.	0.886
A0A1V6PRE9	A0A1V6QLH4	Glyco_hydro_3 domain-containing protein.	N-acetyltransferase domain-containing protein.	0.895
A0A1V6PT09	A0A1V6PWH8	Arylsulfatase; Belongs to the sulfatase family.	Uncharacterized protein.	0.667
A0A1V6PT09	A0A1V6PZE3	Arylsulfatase; Belongs to the sulfatase family.	BetaGal_dom2 domain-containing protein.	0.477
A0A1V6PT09	A0A1V6Q0X6	Arylsulfatase; Belongs to the sulfatase family.	Uncharacterized protein.	0.874
A0A1V6PT09	A0A1V6Q4S4	Arylsulfatase; Belongs to the sulfatase family.	BetaGal_dom2 domain-containing protein.	0.477
A0A1V6PT09	A0A1V6QBV7	Arylsulfatase; Belongs to the sulfatase family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family.	0.903
A0A1V6PT09	A0A1V6QCF8	Arylsulfatase; Belongs to the sulfatase family.	Beta-galactosidase.	0.477
A0A1V6PT09	A0A1V6QCN6	Arylsulfatase; Belongs to the sulfatase family.	BetaGal_dom4_5 domain-containing protein.	0.477
A0A1V6PT09	A0A1V6QIY3	Arylsulfatase; Belongs to the sulfatase family.	Beta-hexosaminidase.	0.876
A0A1V6PWH8	A0A1V6PP67	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A1V6PWH8	A0A1V6PT09	Uncharacterized protein.	Arylsulfatase; Belongs to the sulfatase family.	0.667
A0A1V6PWH8	A0A1V6PY79	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A1V6PWH8	A0A1V6PZE3	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.621
A0A1V6PWH8	A0A1V6PZJ0	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A1V6PWH8	A0A1V6PZX1	Uncharacterized protein.	Uncharacterized protein.	0.621