(10 nodes) Glycosphingolipid biosynthesis - ganglio series network (Penicillium antarcticum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6Q0X6	Uncharacterized protein. (868 aa)
	A0A1V6Q1Y4	Uncharacterized protein. (579 aa)
	A0A1V6PZE3	BetaGal_dom2 domain-containing protein. (1013 aa)
	A0A1V6QCN6	BetaGal_dom4_5 domain-containing protein. (106 aa)
	A0A1V6QIY3	Beta-hexosaminidase. (594 aa)
	A0A1V6QCF8	Beta-galactosidase. (830 aa)
	A0A1V6QCF2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (319 aa)
	A0A1V6QBH3	Uncharacterized protein. (565 aa)
	A0A1V6Q904	Uncharacterized protein. (566 aa)
	A0A1V6Q4S4	BetaGal_dom2 domain-containing protein. (980 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PZE3	A0A1V6Q0X6	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.516
A0A1V6PZE3	A0A1V6QIY3	BetaGal_dom2 domain-containing protein.	Beta-hexosaminidase.	0.632
A0A1V6Q0X6	A0A1V6PZE3	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.516
A0A1V6Q0X6	A0A1V6Q4S4	Uncharacterized protein.	BetaGal_dom2 domain-containing protein.	0.516
A0A1V6Q0X6	A0A1V6Q904	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A1V6Q0X6	A0A1V6QCF8	Uncharacterized protein.	Beta-galactosidase.	0.516
A0A1V6Q0X6	A0A1V6QCN6	Uncharacterized protein.	BetaGal_dom4_5 domain-containing protein.	0.516
A0A1V6Q4S4	A0A1V6Q0X6	BetaGal_dom2 domain-containing protein.	Uncharacterized protein.	0.516
A0A1V6Q4S4	A0A1V6QIY3	BetaGal_dom2 domain-containing protein.	Beta-hexosaminidase.	0.632
A0A1V6Q904	A0A1V6Q0X6	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A1V6Q904	A0A1V6QIY3	Uncharacterized protein.	Beta-hexosaminidase.	0.516
A0A1V6QBH3	A0A1V6QCF2	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.504
A0A1V6QCF2	A0A1V6QBH3	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.504
A0A1V6QCF8	A0A1V6Q0X6	Beta-galactosidase.	Uncharacterized protein.	0.516
A0A1V6QCF8	A0A1V6QCN6	Beta-galactosidase.	BetaGal_dom4_5 domain-containing protein.	0.726
A0A1V6QCF8	A0A1V6QIY3	Beta-galactosidase.	Beta-hexosaminidase.	0.632
A0A1V6QCN6	A0A1V6Q0X6	BetaGal_dom4_5 domain-containing protein.	Uncharacterized protein.	0.516
A0A1V6QCN6	A0A1V6QCF8	BetaGal_dom4_5 domain-containing protein.	Beta-galactosidase.	0.726
A0A1V6QCN6	A0A1V6QIY3	BetaGal_dom4_5 domain-containing protein.	Beta-hexosaminidase.	0.632
A0A1V6QIY3	A0A1V6PZE3	Beta-hexosaminidase.	BetaGal_dom2 domain-containing protein.	0.632