16 items (Penicillium antarcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QB84	Uncharacterized protein. (198 aa)
	A0A1V6QIK0	Uncharacterized protein. (324 aa)
	A0A1V6QHC8	Uncharacterized protein. (285 aa)
	A0A1V6Q7J1	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (664 aa)
	A0A1V6PE14	Uncharacterized protein. (317 aa)
	A0A1V6PQF0	Uncharacterized protein. (230 aa)
	A0A1V6PQJ0	Uncharacterized protein. (131 aa)
	A0A1V6PSZ1	Uncharacterized protein. (144 aa)
	A0A1V6PT22	Uncharacterized protein. (107 aa)
	A0A1V6PTF7	Uncharacterized protein. (474 aa)
	A0A1V6PTI7	Uncharacterized protein. (289 aa)
	A0A1V6Q1P5	Uncharacterized protein. (472 aa)
	A0A1V6Q3H3	Uncharacterized protein. (1019 aa)
	A0A1V6Q6H1	Uncharacterized protein. (279 aa)
	A0A1V6Q8A1	Terpene cyclase. (361 aa)
	A0A1V6QP63	Uncharacterized protein. (452 aa)

Your Current Organism:

Penicillium antarcticum

NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6PE14	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A1V6PQF0	A0A1V6PTF7	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A1V6PQF0	A0A1V6Q3H3	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A1V6PQF0	A0A1V6Q7J1	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.806
A0A1V6PQF0	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.813
A0A1V6PQJ0	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A1V6PSZ1	A0A1V6PTI7	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A1V6PSZ1	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A1V6PT22	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A1V6PTF7	A0A1V6PQF0	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A1V6PTF7	A0A1V6Q1P5	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1V6PTF7	A0A1V6Q3H3	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A1V6PTF7	A0A1V6Q6H1	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A1V6PTF7	A0A1V6Q7J1	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.964
A0A1V6PTF7	A0A1V6QHC8	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A1V6PTF7	A0A1V6QIK0	Uncharacterized protein.	Uncharacterized protein.	0.836
A0A1V6PTF7	A0A1V6QP63	Uncharacterized protein.	Uncharacterized protein.	0.958
A0A1V6PTI7	A0A1V6PSZ1	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A1V6PTI7	A0A1V6QB84	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A1V6Q1P5	A0A1V6PTF7	Uncharacterized protein.	Uncharacterized protein.	0.954