STRINGSTRING
Tlet_0853 Tlet_0853 Tlet_0854 Tlet_0854 Tlet_0855 Tlet_0855 Tlet_0856 Tlet_0856 Tlet_0857 Tlet_0857
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlet_0853PFAM: extracellular solute-binding protein family 5; KEGG: sil:SPO1543 peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein. (524 aa)
Tlet_0854PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4025 binding-protein-dependent transport systems inner membrane component domain protein. (336 aa)
Tlet_0855PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhe:BH12160 ABC transporter, permease protein. (298 aa)
Tlet_0856TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (320 aa)
Tlet_0857TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit. (319 aa)
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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