STRINGSTRING
Tlet_1578 Tlet_1578 Tlet_1579 Tlet_1579 Tlet_1580 Tlet_1580 Tlet_1581 Tlet_1581 Tlet_1582 Tlet_1582
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlet_1578PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL90126 putative solute binding-protein component of transporter. (408 aa)
Tlet_1579PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins. (295 aa)
Tlet_1580PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component. (268 aa)
Tlet_1581PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rle:pRL90127 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family. (791 aa)
Tlet_1582Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM1200 transcriptional regulator, LacI family. (334 aa)
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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