(6 nodes) Mixed, incl. Arabinose metabolic process, and Xylan metabolic process network (Pseudothermotoga lettingae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tlet_1143	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein. (413 aa)
	Tlet_1144	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease. (301 aa)
	Tlet_1145	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component. (289 aa)
	Tlet_1146	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein. (451 aa)
	Tlet_1147	Alpha-N-arabinofuranosidase; PFAM: Carbohydrate-binding CenC domain protein; alpha-L-arabinofuranosidase domain protein; KEGG: cac:CAC3436 probable alpha-arabinofuranosidase. (800 aa)
	Tlet_1148	Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tma:TM0281 alpha-L-arabinofuranosidase. (492 aa)

Your Current Organism:

Pseudothermotoga lettingae

NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Tlet_1143	Tlet_1144	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	0.818
Tlet_1143	Tlet_1145	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	0.769
Tlet_1143	Tlet_1146	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	0.664
Tlet_1143	Tlet_1147	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	Alpha-N-arabinofuranosidase; PFAM: Carbohydrate-binding CenC domain protein; alpha-L-arabinofuranosidase domain protein; KEGG: cac:CAC3436 probable alpha-arabinofuranosidase.	0.737
Tlet_1143	Tlet_1148	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tma:TM0281 alpha-L-arabinofuranosidase.	0.687
Tlet_1144	Tlet_1143	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	0.818
Tlet_1144	Tlet_1145	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	0.965
Tlet_1144	Tlet_1146	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	0.778
Tlet_1144	Tlet_1147	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	Alpha-N-arabinofuranosidase; PFAM: Carbohydrate-binding CenC domain protein; alpha-L-arabinofuranosidase domain protein; KEGG: cac:CAC3436 probable alpha-arabinofuranosidase.	0.783
Tlet_1144	Tlet_1148	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tma:TM0281 alpha-L-arabinofuranosidase.	0.696
Tlet_1145	Tlet_1143	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	0.769
Tlet_1145	Tlet_1144	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	0.965
Tlet_1145	Tlet_1146	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	0.776
Tlet_1145	Tlet_1147	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	Alpha-N-arabinofuranosidase; PFAM: Carbohydrate-binding CenC domain protein; alpha-L-arabinofuranosidase domain protein; KEGG: cac:CAC3436 probable alpha-arabinofuranosidase.	0.783
Tlet_1145	Tlet_1148	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tma:TM0281 alpha-L-arabinofuranosidase.	0.695
Tlet_1146	Tlet_1143	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.	0.664
Tlet_1146	Tlet_1144	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0399 sugar ABC transporter permease.	0.778
Tlet_1146	Tlet_1145	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.	0.776
Tlet_1146	Tlet_1147	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	Alpha-N-arabinofuranosidase; PFAM: Carbohydrate-binding CenC domain protein; alpha-L-arabinofuranosidase domain protein; KEGG: cac:CAC3436 probable alpha-arabinofuranosidase.	0.951
Tlet_1146	Tlet_1148	PFAM: glycoside hydrolase family 10; KEGG: chu:CHU_2105 xylanase; N-terminal CBM4 module, glycoside hydrolase family 10 protein.	Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tma:TM0281 alpha-L-arabinofuranosidase.	0.933

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