STRINGSTRING
Tlet_1094 Tlet_1094 Tlet_1095 Tlet_1095 Tlet_1096 Tlet_1096 Tlet_1457 Tlet_1457 Tlet_1458 Tlet_1458 Tlet_1459 Tlet_1459 Tlet_1460 Tlet_1460
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlet_1094PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tma:TM1432 glycerol-3-phosphate dehydrogenase. (479 aa)
Tlet_1095PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tma:TM1433 oxidoreductase, putative. (403 aa)
Tlet_1096PFAM: protein of unknown function DUF1667; KEGG: tma:TM1434 hypothetical protein. (123 aa)
Tlet_1457PFAM: FAD dependent oxidoreductase; Malate:quinone-oxidoreductase; transport-associated; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tde:TDE0134 oxidoreductase, FAD-dependent. (566 aa)
Tlet_1458Protein of unknown function DUF1667; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; protein of unknown function DUF1667; KEGG: tde:TDE0135 pyridine nucleotide-disulphide oxidoreductase family protein. (537 aa)
Tlet_1459PFAM: carbohydrate kinase FGGY; KEGG: rfr:Rfer_2334 carbohydrate kinase, FGGY. (518 aa)
Tlet_1460PFAM: FAD linked oxidase domain protein; KEGG: tde:TDE0138 alkyldihydroxyacetonephosphate synthase, putative. (569 aa)
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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