(100 nodes) Mixed, incl. Proteasome complex, and Anaphase-promoting complex network (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	jhhlp_008265	Uncharacterized protein. (352 aa)
	jhhlp_008327	Uncharacterized protein. (1965 aa)
	jhhlp_008532	Chitin synthase; Plays a major role in cell wall biogenesis. (916 aa)
	jhhlp_008613	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (656 aa)
	jhhlp_008872	Uncharacterized protein. (216 aa)
	jhhlp_008198	ANK_REP_REGION domain-containing protein. (463 aa)
	jhhlp_008064	AAA domain-containing protein; Belongs to the AAA ATPase family. (424 aa)
	jhhlp_008095	NmrA domain-containing protein. (314 aa)
	jhhlp_008001	ANK_REP_REGION domain-containing protein. (116 aa)
	jhhlp_008196	Uncharacterized protein. (94 aa)
	jhhlp_008000	Uncharacterized protein. (66 aa)
	jhhlp_007549	Alpha-L-AF_C domain-containing protein. (518 aa)
	jhhlp_007741	WD_REPEATS_REGION domain-containing protein. (418 aa)
	jhhlp_007848	Cupin_2 domain-containing protein. (352 aa)
	jhhlp_007030	Proteasome subunit beta. (229 aa)
	jhhlp_007079	Uncharacterized protein. (1826 aa)
	jhhlp_007131	Proteasome subunit beta. (285 aa)
	jhhlp_007154	Proteasome subunit beta. (205 aa)
	jhhlp_007233	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (616 aa)
	jhhlp_007268	VWFA domain-containing protein. (325 aa)
	jhhlp_007333	Uncharacterized protein. (1270 aa)
	jhhlp_007403	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	jhhlp_006755	AAA domain-containing protein; Belongs to the AAA ATPase family. (495 aa)
	jhhlp_006763	ANK_REP_REGION domain-containing protein. (733 aa)
	jhhlp_006926	Uncharacterized protein. (1608 aa)
	jhhlp_005521	Proteasome subunit alpha type. (275 aa)
	jhhlp_005560	PCI domain-containing protein. (433 aa)
	jhhlp_005704	Ubiquitin carboxyl-terminal hydrolase. (510 aa)
	jhhlp_005757	Uncharacterized protein. (205 aa)
	jhhlp_005845	Uncharacterized protein. (266 aa)
	jhhlp_005957	Uncharacterized protein. (792 aa)
	jhhlp_006021	HORMA domain-containing protein. (574 aa)
	jhhlp_006167	Uncharacterized protein. (732 aa)
	jhhlp_006172	Uncharacterized protein. (266 aa)
	jhhlp_006434	Proteasome endopeptidase complex. (233 aa)
	jhhlp_006477	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (489 aa)
	jhhlp_006460	ANK_REP_REGION domain-containing protein. (260 aa)
	jhhlp_006625	Uncharacterized protein. (679 aa)
	jhhlp_006619	Uncharacterized protein. (1326 aa)
	jhhlp_005161	WD_REPEATS_REGION domain-containing protein. (588 aa)
	jhhlp_005206	MPN domain-containing protein. (339 aa)
	jhhlp_005219	Uncharacterized protein. (492 aa)
	jhhlp_005205	Uncharacterized protein. (475 aa)
	jhhlp_004962	TPR_REGION domain-containing protein. (1599 aa)
	jhhlp_004744	WD_REPEATS_REGION domain-containing protein. (1628 aa)
	jhhlp_003515	Proteasome endopeptidase complex. (278 aa)
	jhhlp_003593	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (897 aa)
	jhhlp_003649	WD_REPEATS_REGION domain-containing protein. (366 aa)
	jhhlp_003684	Uncharacterized protein. (1041 aa)
	jhhlp_003944	ANK_REP_REGION domain-containing protein. (655 aa)
	jhhlp_004494	UBIQUITIN_CONJUGAT_2 domain-containing protein. (194 aa)
	jhhlp_004618	Uncharacterized protein. (667 aa)
	jhhlp_001887	ANK_REP_REGION domain-containing protein. (1244 aa)
	jhhlp_001930	Proteasome subunit alpha type. (266 aa)
	jhhlp_002075	Uncharacterized protein. (762 aa)
	jhhlp_002217	Uncharacterized protein. (381 aa)
	jhhlp_002224	Pr_beta_C domain-containing protein. (273 aa)
	jhhlp_002308	CULLIN_2 domain-containing protein; Belongs to the cullin family. (871 aa)
	jhhlp_002339	Proteasome subunit beta; Belongs to the peptidase T1B family. (269 aa)
	jhhlp_002337	AAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
	jhhlp_002435	Proteasome subunit alpha type. (254 aa)
	jhhlp_002439	Proteasome subunit beta. (258 aa)
	jhhlp_002539	Uncharacterized protein. (577 aa)
	jhhlp_002638	PCI domain-containing protein. (270 aa)
	jhhlp_002626	PCI domain-containing protein. (421 aa)
	jhhlp_002793	Uncharacterized protein. (1141 aa)
	jhhlp_002835	AAA domain-containing protein; Belongs to the AAA ATPase family. (446 aa)
	jhhlp_002884	Uncharacterized protein. (371 aa)
	jhhlp_002879	ANK_REP_REGION domain-containing protein. (345 aa)
	jhhlp_002938	Uncharacterized protein. (357 aa)
	jhhlp_002995	AAA domain-containing protein; Belongs to the AAA ATPase family. (421 aa)
	jhhlp_002983	PCI domain-containing protein. (580 aa)
	jhhlp_003067	Proteasome subunit alpha type. (251 aa)
	jhhlp_003117	Uncharacterized protein. (1959 aa)
	jhhlp_003178	PCI domain-containing protein. (497 aa)
	jhhlp_003188	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (429 aa)
	jhhlp_003219	Uncharacterized protein. (739 aa)
	jhhlp_001781	WD_REPEATS_REGION domain-containing protein. (604 aa)
	jhhlp_001800	Uncharacterized protein. (618 aa)
	jhhlp_001804	Ubiquitin carboxyl-terminal hydrolase. (321 aa)
	jhhlp_001716	Uncharacterized protein. (329 aa)
	jhhlp_001700	Uncharacterized protein. (117 aa)
	jhhlp_001124	Uncharacterized protein. (324 aa)
	jhhlp_001366	ANAPC5 domain-containing protein. (783 aa)
	jhhlp_001392	Ubiquitin carboxyl-terminal hydrolase. (552 aa)
	jhhlp_001473	SPX domain-containing protein. (783 aa)
	jhhlp_001472	Uncharacterized protein. (751 aa)
	jhhlp_001479	DOC domain-containing protein. (310 aa)
	jhhlp_001470	Uncharacterized protein. (585 aa)
	jhhlp_001612	ANK_REP_REGION domain-containing protein. (938 aa)
	jhhlp_000754	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (1428 aa)
	jhhlp_000753	AAA domain-containing protein. (709 aa)
	jhhlp_000775	ANK_REP_REGION domain-containing protein. (690 aa)
	jhhlp_000824	Uncharacterized protein. (344 aa)
	jhhlp_000941	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (386 aa)
	jhhlp_000945	Uncharacterized protein. (114 aa)
	jhhlp_001019	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (112 aa)
	jhhlp_000426	Uncharacterized protein. (758 aa)
	jhhlp_000435	MPN domain-containing protein. (336 aa)
	jhhlp_000473	Uncharacterized protein. (336 aa)

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000426	jhhlp_000435	A0A2N3NKV8	A0A2N3NKY5	Uncharacterized protein.	MPN domain-containing protein.	0.662
jhhlp_000426	jhhlp_000473	A0A2N3NKV8	A0A2N3NL57	Uncharacterized protein.	Uncharacterized protein.	0.534
jhhlp_000426	jhhlp_000753	A0A2N3NKV8	A0A2N3NJC1	Uncharacterized protein.	AAA domain-containing protein.	0.624
jhhlp_000426	jhhlp_000754	A0A2N3NKV8	A0A2N3NJB9	Uncharacterized protein.	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.	0.404
jhhlp_000426	jhhlp_000775	A0A2N3NKV8	A0A2N3NJE3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.404
jhhlp_000426	jhhlp_000824	A0A2N3NKV8	A0A2N3NJJ2	Uncharacterized protein.	Uncharacterized protein.	0.404
jhhlp_000426	jhhlp_000941	A0A2N3NKV8	A0A2N3NJX1	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.922
jhhlp_000426	jhhlp_000945	A0A2N3NKV8	A0A2N3NJX7	Uncharacterized protein.	Uncharacterized protein.	0.906
jhhlp_000426	jhhlp_001019	A0A2N3NKV8	A0A2N3NK63	Uncharacterized protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.699
jhhlp_000426	jhhlp_001124	A0A2N3NKV8	A0A2N3NHC3	Uncharacterized protein.	Uncharacterized protein.	0.541
jhhlp_000426	jhhlp_001366	A0A2N3NKV8	A0A2N3NI11	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.948
jhhlp_000426	jhhlp_001479	A0A2N3NKV8	A0A2N3NIE6	Uncharacterized protein.	DOC domain-containing protein.	0.951
jhhlp_000426	jhhlp_001612	A0A2N3NKV8	A0A2N3NIX9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.404
jhhlp_000426	jhhlp_001700	A0A2N3NKV8	A0A2N3NH91	Uncharacterized protein.	Uncharacterized protein.	0.544
jhhlp_000426	jhhlp_001716	A0A2N3NKV8	A0A2N3NH26	Uncharacterized protein.	Uncharacterized protein.	0.404
jhhlp_000426	jhhlp_001800	A0A2N3NKV8	A0A2N3NGR1	Uncharacterized protein.	Uncharacterized protein.	0.404
jhhlp_000426	jhhlp_001887	A0A2N3NKV8	A0A2N3NCL1	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.404
jhhlp_000426	jhhlp_001930	A0A2N3NKV8	A0A2N3NCL5	Uncharacterized protein.	Proteasome subunit alpha type.	0.631
jhhlp_000426	jhhlp_002075	A0A2N3NKV8	A0A2N3ND01	Uncharacterized protein.	Uncharacterized protein.	0.956
jhhlp_000426	jhhlp_002224	A0A2N3NKV8	A0A2N3NDH5	Uncharacterized protein.	Pr_beta_C domain-containing protein.	0.631