(36 nodes) Tetratricopeptide repeat network (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	jhhlp_004962	TPR_REGION domain-containing protein. (1599 aa)
	jhhlp_004955	Uncharacterized protein. (879 aa)
	jhhlp_005330	Uncharacterized protein. (550 aa)
	jhhlp_005262	Uncharacterized protein. (581 aa)
	jhhlp_006619	Uncharacterized protein. (1326 aa)
	jhhlp_006625	Uncharacterized protein. (679 aa)
	jhhlp_006488	Uncharacterized protein. (677 aa)
	jhhlp_006380	Uncharacterized protein. (621 aa)
	jhhlp_006178	Uncharacterized protein. (516 aa)
	jhhlp_006145	Uncharacterized protein. (953 aa)
	jhhlp_005772	Uncharacterized protein. (1426 aa)
	jhhlp_005666	Uncharacterized protein. (517 aa)
	jhhlp_006834	Uncharacterized protein. (772 aa)
	jhhlp_006761	Uncharacterized protein. (854 aa)
	jhhlp_007812	TPR_REGION domain-containing protein. (1000 aa)
	jhhlp_007618	Uncharacterized protein. (371 aa)
	jhhlp_008067	E3 ubiquitin-protein ligase PEP5. (971 aa)
	jhhlp_008199	NB-ARC domain-containing protein. (753 aa)
	jhhlp_001102	TPR_REGION domain-containing protein. (649 aa)
	jhhlp_001640	TPR_REGION domain-containing protein. (1430 aa)
	jhhlp_000074	Uncharacterized protein. (537 aa)
	jhhlp_000330	PNPLA domain-containing protein. (1171 aa)
	CLU1	Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. (1269 aa)
	jhhlp_000235	Uncharacterized protein. (993 aa)
	jhhlp_008746	Serine/threonine-protein phosphatase. (492 aa)
	jhhlp_001774	Uncharacterized protein. (265 aa)
	jhhlp_001771	Uncharacterized protein. (1116 aa)
	jhhlp_003219	Uncharacterized protein. (739 aa)
	jhhlp_002816	TPR_REGION domain-containing protein. (203 aa)
	jhhlp_002637	TPR_REGION domain-containing protein. (978 aa)
	jhhlp_002409	TPR_REGION domain-containing protein. (377 aa)
	jhhlp_001982	Uncharacterized protein. (781 aa)
	jhhlp_001955	Uncharacterized protein. (1209 aa)
	jhhlp_004606	Uncharacterized protein. (1222 aa)
	jhhlp_004618	Uncharacterized protein. (667 aa)
	jhhlp_003927	Uncharacterized protein. (271 aa)

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLU1	jhhlp_001982	A0A2N3NKD5	A0A2N3NCZ9	Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria.	Uncharacterized protein.	0.659
jhhlp_000330	jhhlp_001982	A0A2N3NKP2	A0A2N3NCZ9	PNPLA domain-containing protein.	Uncharacterized protein.	0.429
jhhlp_000330	jhhlp_005666	A0A2N3NKP2	A0A2N3N3S8	PNPLA domain-containing protein.	Uncharacterized protein.	0.429
jhhlp_000330	jhhlp_006619	A0A2N3NKP2	A0A2N3N6H0	PNPLA domain-containing protein.	Uncharacterized protein.	0.769
jhhlp_000330	jhhlp_006625	A0A2N3NKP2	A0A2N3N6D3	PNPLA domain-containing protein.	Uncharacterized protein.	0.697
jhhlp_001982	CLU1	A0A2N3NCZ9	A0A2N3NKD5	Uncharacterized protein.	Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria.	0.659
jhhlp_001982	jhhlp_000330	A0A2N3NCZ9	A0A2N3NKP2	Uncharacterized protein.	PNPLA domain-containing protein.	0.429
jhhlp_001982	jhhlp_003219	A0A2N3NCZ9	A0A2N3NG98	Uncharacterized protein.	Uncharacterized protein.	0.438
jhhlp_001982	jhhlp_003927	A0A2N3NCZ9	A0A2N3NA49	Uncharacterized protein.	Uncharacterized protein.	0.437
jhhlp_001982	jhhlp_004606	A0A2N3NCZ9	A0A2N3NC96	Uncharacterized protein.	Uncharacterized protein.	0.429
jhhlp_001982	jhhlp_004618	A0A2N3NCZ9	A0A2N3NC21	Uncharacterized protein.	Uncharacterized protein.	0.438
jhhlp_001982	jhhlp_004962	A0A2N3NCZ9	A0A2N3N802	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.429
jhhlp_001982	jhhlp_005262	A0A2N3NCZ9	A0A2N3N7B0	Uncharacterized protein.	Uncharacterized protein.	0.490
jhhlp_001982	jhhlp_005666	A0A2N3NCZ9	A0A2N3N3S8	Uncharacterized protein.	Uncharacterized protein.	0.817
jhhlp_001982	jhhlp_006834	A0A2N3NCZ9	A0A2N3N2V7	Uncharacterized protein.	Uncharacterized protein.	0.429
jhhlp_001982	jhhlp_008199	A0A2N3NCZ9	A0A2N3MZB1	Uncharacterized protein.	NB-ARC domain-containing protein.	0.429
jhhlp_003219	jhhlp_001982	A0A2N3NG98	A0A2N3NCZ9	Uncharacterized protein.	Uncharacterized protein.	0.438
jhhlp_003219	jhhlp_005666	A0A2N3NG98	A0A2N3N3S8	Uncharacterized protein.	Uncharacterized protein.	0.429
jhhlp_003219	jhhlp_006619	A0A2N3NG98	A0A2N3N6H0	Uncharacterized protein.	Uncharacterized protein.	0.974
jhhlp_003219	jhhlp_006625	A0A2N3NG98	A0A2N3N6D3	Uncharacterized protein.	Uncharacterized protein.	0.974