(10 nodes) tRNA 5-leader removal, and Ribonuclease P activity network (Puccinia graminis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGTG_02906	Ribonuclease P protein subunit. (301 aa)
	PGTG_06259	Uncharacterized protein. (373 aa)
	PGTG_09770	Uncharacterized protein. (222 aa)
	PGTG_10031	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (136 aa)
	PGTG_12116	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (136 aa)
	PGTG_12464	Uncharacterized protein. (265 aa)
	PGTG_13270	Uncharacterized protein. (378 aa)
	PGTG_15917	Uncharacterized protein. (806 aa)
	PGTG_17482	Uncharacterized protein. (463 aa)
	PGTG_18535	Uncharacterized protein. (432 aa)

Your Current Organism:

Puccinia graminis

NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGTG_02906	PGTG_06259	E3JWP0	E3K7K3	Ribonuclease P protein subunit.	Uncharacterized protein.	0.972
PGTG_02906	PGTG_09770	E3JWP0	E3KID2	Ribonuclease P protein subunit.	Uncharacterized protein.	0.999
PGTG_02906	PGTG_10031	E3JWP0	E3KJ36	Ribonuclease P protein subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.996
PGTG_02906	PGTG_12116	E3JWP0	E3KPD5	Ribonuclease P protein subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.996
PGTG_02906	PGTG_12464	E3JWP0	E3KQD3	Ribonuclease P protein subunit.	Uncharacterized protein.	0.951
PGTG_02906	PGTG_13270	E3JWP0	E3KRX6	Ribonuclease P protein subunit.	Uncharacterized protein.	0.999
PGTG_02906	PGTG_15917	E3JWP0	E3L0H1	Ribonuclease P protein subunit.	Uncharacterized protein.	0.999
PGTG_02906	PGTG_17482	E3JWP0	E3L5C0	Ribonuclease P protein subunit.	Uncharacterized protein.	0.927
PGTG_02906	PGTG_18535	E3JWP0	E3L7L2	Ribonuclease P protein subunit.	Uncharacterized protein.	0.975
PGTG_06259	PGTG_02906	E3K7K3	E3JWP0	Uncharacterized protein.	Ribonuclease P protein subunit.	0.972
PGTG_06259	PGTG_09770	E3K7K3	E3KID2	Uncharacterized protein.	Uncharacterized protein.	0.951
PGTG_06259	PGTG_10031	E3K7K3	E3KJ36	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.947
PGTG_06259	PGTG_12116	E3K7K3	E3KPD5	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.947
PGTG_06259	PGTG_13270	E3K7K3	E3KRX6	Uncharacterized protein.	Uncharacterized protein.	0.974
PGTG_06259	PGTG_15917	E3K7K3	E3L0H1	Uncharacterized protein.	Uncharacterized protein.	0.974
PGTG_06259	PGTG_17482	E3K7K3	E3L5C0	Uncharacterized protein.	Uncharacterized protein.	0.900
PGTG_06259	PGTG_18535	E3K7K3	E3L7L2	Uncharacterized protein.	Uncharacterized protein.	0.588
PGTG_09770	PGTG_02906	E3KID2	E3JWP0	Uncharacterized protein.	Ribonuclease P protein subunit.	0.999
PGTG_09770	PGTG_06259	E3KID2	E3K7K3	Uncharacterized protein.	Uncharacterized protein.	0.951
PGTG_09770	PGTG_10031	E3KID2	E3KJ36	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.995