STRINGSTRING
PGTG_09399 PGTG_09399 PGTG_01903 PGTG_01903 PGTG_06954 PGTG_06954 PGTG_12721 PGTG_12721 PGTG_16258 PGTG_16258 PGTG_21339 PGTG_21339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGTG_09399Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (742 aa)
PGTG_01903Homocitrate synthase, mitochondrial; Belongs to the alpha-IPM synthase/homocitrate synthase family. (476 aa)
PGTG_06954Spermidine synthase; Belongs to the spermidine/spermine synthase family. (759 aa)
PGTG_12721Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (371 aa)
PGTG_16258ACPS domain-containing protein. (330 aa)
PGTG_21339Uncharacterized protein. (114 aa)
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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