(7 nodes) FMN-binding split barrel network (Puccinia graminis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGTG_07923	Uncharacterized protein. (359 aa)
	PGTG_09029	Pyrid_ox_like domain-containing protein. (195 aa)
	PGTG_13591	Uncharacterized protein. (292 aa)
	PGTG_18848	Pyrid_ox_like domain-containing protein. (195 aa)
	PGTG_02335	Flavin_Reduct domain-containing protein. (324 aa)
	PGTG_13092	Putative_PNPOx domain-containing protein. (187 aa)
	PGTG_12439	Pyridox_oxase_2 domain-containing protein. (259 aa)

Your Current Organism:

Puccinia graminis

NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGTG_12439	PGTG_13092	E3KQA8	E3KQY5	Pyridox_oxase_2 domain-containing protein.	Putative_PNPOx domain-containing protein.	0.924
PGTG_12439	PGTG_13591	E3KQA8	E3KSX7	Pyridox_oxase_2 domain-containing protein.	Uncharacterized protein.	0.924
PGTG_13092	PGTG_12439	E3KQY5	E3KQA8	Putative_PNPOx domain-containing protein.	Pyridox_oxase_2 domain-containing protein.	0.924
PGTG_13092	PGTG_13591	E3KQY5	E3KSX7	Putative_PNPOx domain-containing protein.	Uncharacterized protein.	0.901
PGTG_13591	PGTG_12439	E3KSX7	E3KQA8	Uncharacterized protein.	Pyridox_oxase_2 domain-containing protein.	0.924
PGTG_13591	PGTG_13092	E3KSX7	E3KQY5	Uncharacterized protein.	Putative_PNPOx domain-containing protein.	0.901