STRINGSTRING
PGTG_13407 PGTG_13407 PGTG_12641 PGTG_12641 PGTG_13068 PGTG_13068 PGTG_18882 PGTG_18882 PGTG_08310 PGTG_08310 PGTG_17533 PGTG_17533 PGTG_04828 PGTG_04828 PGTG_00549 PGTG_00549 PGTG_14767 PGTG_14767
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGTG_13407Phosphoinositide phospholipase C. (841 aa)
PGTG_12641Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1076 aa)
PGTG_13068Polyubiquitin-A. (609 aa)
PGTG_18882Uncharacterized protein. (505 aa)
PGTG_08310Ubiquitin-40S ribosomal protein S27a-2. (159 aa)
PGTG_17533CIA30 domain-containing protein. (241 aa)
PGTG_04828AGC/PDK1 protein kinase. (856 aa)
PGTG_00549RING-type domain-containing protein. (499 aa)
PGTG_14767Uncharacterized protein. (504 aa)
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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