STRINGSTRING
PGTG_00714 PGTG_00714 PGTG_07880 PGTG_07880 PGTG_08310 PGTG_08310 PGTG_08578 PGTG_08578 PGTG_08704 PGTG_08704 PGTG_10420 PGTG_10420 PGTG_13053 PGTG_13053 PGTG_13068 PGTG_13068 PGTG_13641 PGTG_13641 PGTG_14553 PGTG_14553 PGTG_17533 PGTG_17533 PGTG_21658 PGTG_21658
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGTG_00714CAMK/CAMKL/CHK1 protein kinase. (539 aa)
PGTG_07880HAL protein kinase. (884 aa)
PGTG_08310Ubiquitin-40S ribosomal protein S27a-2. (159 aa)
PGTG_08578Rhodanese domain-containing protein. (867 aa)
PGTG_08704Rhodanese domain-containing protein. (898 aa)
PGTG_10420HAL protein kinase. (693 aa)
PGTG_13053PA28_beta domain-containing protein. (256 aa)
PGTG_13068Polyubiquitin-A. (609 aa)
PGTG_13641Protein kinase domain-containing protein. (171 aa)
PGTG_14553Protein kinase domain-containing protein. (127 aa)
PGTG_17533CIA30 domain-containing protein. (241 aa)
PGTG_21658RAN protein kinase. (1087 aa)
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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