(15 nodes) Death Receptor Signaling network (Puccinia graminis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGTG_17533	CIA30 domain-containing protein. (241 aa)
	PGTG_19484	Uncharacterized protein. (517 aa)
	PGTG_19252	DH domain-containing protein. (553 aa)
	PGTG_13442	Uncharacterized protein. (1204 aa)
	PGTG_00549	RING-type domain-containing protein. (499 aa)
	PGTG_03674	Uncharacterized protein. (867 aa)
	PGTG_03701	DH domain-containing protein. (1216 aa)
	PGTG_07809	Uncharacterized protein. (592 aa)
	PGTG_07822	Uncharacterized protein. (476 aa)
	PGTG_07957	Ras-like C3 botulinum toxin substrate 1. (196 aa)
	PGTG_08310	Ubiquitin-40S ribosomal protein S27a-2. (159 aa)
	PGTG_09846	Uncharacterized protein. (1149 aa)
	PGTG_09181	Uncharacterized protein. (947 aa)
	PGTG_13068	Polyubiquitin-A. (609 aa)
	PGTG_14970	Guanine nucleotide-binding protein subunit beta-like protein. (278 aa)

Your Current Organism:

Puccinia graminis

NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGTG_00549	PGTG_08310	E3JRC9	E3KDZ2	RING-type domain-containing protein.	Ubiquitin-40S ribosomal protein S27a-2.	0.950
PGTG_00549	PGTG_13068	E3JRC9	E3KQW1	RING-type domain-containing protein.	Polyubiquitin-A.	0.978
PGTG_00549	PGTG_17533	E3JRC9	E3L552	RING-type domain-containing protein.	CIA30 domain-containing protein.	0.950
PGTG_03674	PGTG_07957	E3K093	E3KBN7	Uncharacterized protein.	Ras-like C3 botulinum toxin substrate 1.	0.925
PGTG_03701	PGTG_07957	E3K0C0	E3KBN7	DH domain-containing protein.	Ras-like C3 botulinum toxin substrate 1.	0.432
PGTG_07809	PGTG_07957	E3KB28	E3KBN7	Uncharacterized protein.	Ras-like C3 botulinum toxin substrate 1.	0.925
PGTG_07822	PGTG_07957	E3KB53	E3KBN7	Uncharacterized protein.	Ras-like C3 botulinum toxin substrate 1.	0.925
PGTG_07957	PGTG_03674	E3KBN7	E3K093	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.925
PGTG_07957	PGTG_03701	E3KBN7	E3K0C0	Ras-like C3 botulinum toxin substrate 1.	DH domain-containing protein.	0.432
PGTG_07957	PGTG_07809	E3KBN7	E3KB28	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.925
PGTG_07957	PGTG_07822	E3KBN7	E3KB53	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.925
PGTG_07957	PGTG_08310	E3KBN7	E3KDZ2	Ras-like C3 botulinum toxin substrate 1.	Ubiquitin-40S ribosomal protein S27a-2.	0.565
PGTG_07957	PGTG_09181	E3KBN7	E3KFU3	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.490
PGTG_07957	PGTG_09846	E3KBN7	E3KF51	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.432
PGTG_07957	PGTG_13068	E3KBN7	E3KQW1	Ras-like C3 botulinum toxin substrate 1.	Polyubiquitin-A.	0.682
PGTG_07957	PGTG_13442	E3KBN7	H6QT78	Ras-like C3 botulinum toxin substrate 1.	Uncharacterized protein.	0.626
PGTG_07957	PGTG_17533	E3KBN7	E3L552	Ras-like C3 botulinum toxin substrate 1.	CIA30 domain-containing protein.	0.565
PGTG_07957	PGTG_19252	E3KBN7	E3LA56	Ras-like C3 botulinum toxin substrate 1.	DH domain-containing protein.	0.626
PGTG_08310	PGTG_00549	E3KDZ2	E3JRC9	Ubiquitin-40S ribosomal protein S27a-2.	RING-type domain-containing protein.	0.950
PGTG_08310	PGTG_07957	E3KDZ2	E3KBN7	Ubiquitin-40S ribosomal protein S27a-2.	Ras-like C3 botulinum toxin substrate 1.	0.565