(13 nodes) Structural constituent of nuclear pore, and Ran binding domain network (Bathycoccus prasinos)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Bathy02g02500	Uncharacterized protein. (1561 aa)
	Bathy03g05760	Nuclear pore complex protein-related (ISS). (459 aa)
	Bathy03g02450	PPIase cyclophilin-type domain-containing protein. (317 aa)
	Bathy05g03280	CSD_1 domain-containing protein. (2627 aa)
	Bathy11g02230	Nucleoporin_N domain-containing protein. (1027 aa)
	Bathy13g00420	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (302 aa)
	Bathy01g01640	Uncharacterized protein. (296 aa)
	Bathy15g02240	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (988 aa)
	Bathy15g01160	Nup54 domain-containing protein. (718 aa)
	Bathy15g02310	Uncharacterized protein. (1207 aa)
	Bathy09g02600	RRM Nup35-type domain-containing protein. (512 aa)
	Bathy06g05190	Uncharacterized protein. (2199 aa)
	Bathy11g02250	RanBD1 domain-containing protein. (259 aa)

Your Current Organism:

Bathycoccus prasinos

NCBI taxonomy Id: 41875
Other names: B. prasinos

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bathy01g01640	Bathy02g02500	K8ENW0	K8EBJ7	Uncharacterized protein.	Uncharacterized protein.	0.941
Bathy01g01640	Bathy03g02450	K8ENW0	K8ECP5	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.999
Bathy01g01640	Bathy03g05760	K8ENW0	K8ECG0	Uncharacterized protein.	Nuclear pore complex protein-related (ISS).	0.992
Bathy01g01640	Bathy05g03280	K8ENW0	K8EEZ8	Uncharacterized protein.	CSD_1 domain-containing protein.	0.988
Bathy01g01640	Bathy06g05190	K8ENW0	K8F721	Uncharacterized protein.	Uncharacterized protein.	0.935
Bathy01g01640	Bathy09g02600	K8ENW0	K8F3F7	Uncharacterized protein.	RRM Nup35-type domain-containing protein.	0.937
Bathy01g01640	Bathy11g02230	K8ENW0	K8EKE5	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.922
Bathy01g01640	Bathy11g02250	K8ENW0	K8FAG0	Uncharacterized protein.	RanBD1 domain-containing protein.	0.999
Bathy01g01640	Bathy13g00420	K8ENW0	K8ELW5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.984
Bathy01g01640	Bathy15g01160	K8ENW0	K8EPF0	Uncharacterized protein.	Nup54 domain-containing protein.	0.966
Bathy01g01640	Bathy15g02240	K8ENW0	K8EPB4	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.990
Bathy01g01640	Bathy15g02310	K8ENW0	K8EQ54	Uncharacterized protein.	Uncharacterized protein.	0.991
Bathy02g02500	Bathy01g01640	K8EBJ7	K8ENW0	Uncharacterized protein.	Uncharacterized protein.	0.941
Bathy02g02500	Bathy03g02450	K8EBJ7	K8ECP5	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.999
Bathy02g02500	Bathy03g05760	K8EBJ7	K8ECG0	Uncharacterized protein.	Nuclear pore complex protein-related (ISS).	0.940
Bathy02g02500	Bathy05g03280	K8EBJ7	K8EEZ8	Uncharacterized protein.	CSD_1 domain-containing protein.	0.984
Bathy02g02500	Bathy06g05190	K8EBJ7	K8F721	Uncharacterized protein.	Uncharacterized protein.	0.918
Bathy02g02500	Bathy09g02600	K8EBJ7	K8F3F7	Uncharacterized protein.	RRM Nup35-type domain-containing protein.	0.933
Bathy02g02500	Bathy11g02230	K8EBJ7	K8EKE5	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.923
Bathy02g02500	Bathy11g02250	K8EBJ7	K8FAG0	Uncharacterized protein.	RanBD1 domain-containing protein.	0.999