STRINGSTRING
murF murF KXB81944.1 KXB81944.1 uppP uppP murB murB KXB79016.1 KXB79016.1 KXB78963.1 KXB78963.1 KXB78746.1 KXB78746.1 KXB78461.1 KXB78461.1 KXB78047.1 KXB78047.1 ddl ddl KXB78103.1 KXB78103.1 KXB78139.1 KXB78139.1 KXB77444.1 KXB77444.1 murE murE mraY mraY murD murD murG murG KXB77450.1 KXB77450.1 KXB77456.1 KXB77456.1 murA murA KXB77504.1 KXB77504.1 KXB77270.1 KXB77270.1 KXB77048.1 KXB77048.1 KXB76001.1 KXB76001.1 mtgA mtgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (441 aa)
KXB81944.1Transglycosylase; KEGG: pdn:HMPREF9137_0007 0. transglycosylase; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82. (842 aa)
uppPPutative undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (284 aa)
murBUDP-N-acetylmuramate dehydrogenase; Cell wall formation. (334 aa)
KXB79016.1Hypothetical protein. (305 aa)
KXB78963.1Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (252 aa)
KXB78746.1KEGG: pmz:HMPREF0659_A6104 6.1e-122 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259; Psort location: Periplasmic, score: 9.44. (445 aa)
KXB78461.1PAP2 family protein; KEGG: ccm:Ccan_06070 6.4e-24 Dolicholpyrophosphatase; Psort location: CytoplasmicMembrane, score: 10.00. (229 aa)
KXB78047.1KEGG: rai:RA0C_1856 1.1e-17 pasta domain containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96. (255 aa)
ddlD-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (332 aa)
KXB78103.1PAP2 family protein; KEGG: cbj:H04402_00358 0.00032 phosphatidylglycerophosphatase B. (241 aa)
KXB78139.1Putative penicillin-binding protein 2; KEGG: bsa:Bacsa_1389 4.0e-212 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 7.88. (711 aa)
KXB77444.1KEGG: pdn:HMPREF9137_0791 0. penicillin-binding protein, transpeptidase domain-containing protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.82. (717 aa)
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (485 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (423 aa)
murDUDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (443 aa)
murGUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (367 aa)
KXB77450.1Putative UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (459 aa)
KXB77456.1PAP2 family protein; KEGG: ccm:Ccan_14540 6.8e-20 Dolicholpyrophosphatase; Psort location: CytoplasmicMembrane, score: 10.00. (226 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (437 aa)
KXB77504.1SNARE-like domain protein; KEGG: gtn:GTNG_0171 3.1e-08 alkaline phosphatase-like protein; K01077 alkaline phosphatase; Psort location: CytoplasmicMembrane, score: 9.82. (151 aa)
KXB77270.1Abi-like protein; Psort location: Cytoplasmic, score: 8.96. (308 aa)
KXB77048.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (869 aa)
KXB76001.1Transglycosylase; KEGG: pdn:HMPREF9137_2310 0. transglycosylase; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82. (767 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (229 aa)
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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