28 items (Brugia timori) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BTMF_LOCUS1367	CUE domain-containing protein. (421 aa)
	BTMF_LOCUS876	Uncharacterized protein. (67 aa)
	A0A0R3Q666	Uncharacterized protein. (331 aa)
	BTMF_LOCUS1780	Uncharacterized protein. (292 aa)
	A0A0R3Q8A0	Uncharacterized protein. (294 aa)
	BTMF_LOCUS2970	PLD phosphodiesterase domain-containing protein. (188 aa)
	BTMF_LOCUS3489	Uncharacterized protein. (83 aa)
	BTMF_LOCUS4085	Uncharacterized protein. (128 aa)
	BTMF_LOCUS4646	Acyltransf_C domain-containing protein. (165 aa)
	BTMF_LOCUS6818	Uncharacterized protein. (306 aa)
	BTMF_LOCUS7842	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (264 aa)
	BTMF_LOCUS8850	Phospholipase A(2). (168 aa)
	A0A0R3QSX6	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (383 aa)
	BTMF_LOCUS9008	Uncharacterized protein. (308 aa)
	BTMF_LOCUS9886	Uncharacterized protein. (478 aa)
	BTMF_LOCUS9887	Uncharacterized protein. (107 aa)
	A0A0R3QXV2	SURF6 domain-containing protein. (486 aa)
	A0A0R3R0F7	PLD phosphodiesterase domain-containing protein. (176 aa)
	A0A0R3R0F8	Uncharacterized protein. (126 aa)
	A0A0R3R1M5	PlsC domain-containing protein. (174 aa)
	A0A0R3R421	PlsC domain-containing protein. (292 aa)
	A0A0R3R441	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (213 aa)
	A0A0R3R4E2	Phospholipase A(2). (148 aa)
	A0A0R3R942	Uncharacterized protein. (177 aa)
	A0A0R3RB41	Uncharacterized protein. (114 aa)
	A0A0R3RCF0	DAO domain-containing protein. (164 aa)
	A0A0R3RD56	DAO domain-containing protein. (194 aa)
	A0A0R3RDF9	PlsC domain-containing protein. (108 aa)

Your Current Organism:

Brugia timori

NCBI taxonomy Id: 42155
Other names: B. timori

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3Q666	A0A0R3Q8A0	A0A0R3Q666	A0A0R3Q8A0	Uncharacterized protein.	Uncharacterized protein.	0.687
A0A0R3Q666	A0A0R3QSX6	A0A0R3Q666	A0A0R3QSX6	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.663
A0A0R3Q666	A0A0R3R0F7	A0A0R3Q666	A0A0R3R0F7	Uncharacterized protein.	PLD phosphodiesterase domain-containing protein.	0.507
A0A0R3Q666	A0A0R3R0F8	A0A0R3Q666	A0A0R3R0F8	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0R3Q666	A0A0R3R1M5	A0A0R3Q666	A0A0R3R1M5	Uncharacterized protein.	PlsC domain-containing protein.	0.610
A0A0R3Q666	A0A0R3R421	A0A0R3Q666	A0A0R3R421	Uncharacterized protein.	PlsC domain-containing protein.	0.747
A0A0R3Q666	A0A0R3R441	A0A0R3Q666	A0A0R3R441	Uncharacterized protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.	0.610
A0A0R3Q666	A0A0R3R4E2	A0A0R3Q666	A0A0R3R4E2	Uncharacterized protein.	Phospholipase A(2).	0.456
A0A0R3Q666	A0A0R3R942	A0A0R3Q666	A0A0R3R942	Uncharacterized protein.	Uncharacterized protein.	0.551
A0A0R3Q666	A0A0R3RCF0	A0A0R3Q666	A0A0R3RCF0	Uncharacterized protein.	DAO domain-containing protein.	0.606
A0A0R3Q666	A0A0R3RD56	A0A0R3Q666	A0A0R3RD56	Uncharacterized protein.	DAO domain-containing protein.	0.606
A0A0R3Q666	BTMF_LOCUS1367	A0A0R3Q666	A0A0R3Q6T5	Uncharacterized protein.	CUE domain-containing protein.	0.510
A0A0R3Q666	BTMF_LOCUS1780	A0A0R3Q666	A0A0R3Q7Z8	Uncharacterized protein.	Uncharacterized protein.	0.551
A0A0R3Q666	BTMF_LOCUS2970	A0A0R3Q666	A0A0R3QBD8	Uncharacterized protein.	PLD phosphodiesterase domain-containing protein.	0.507
A0A0R3Q666	BTMF_LOCUS3489	A0A0R3Q666	A0A0R3QCV5	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0R3Q666	BTMF_LOCUS4085	A0A0R3Q666	A0A0R3QEK5	Uncharacterized protein.	Uncharacterized protein.	0.687
A0A0R3Q666	BTMF_LOCUS7842	A0A0R3Q666	A0A0R3QQ06	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.663
A0A0R3Q666	BTMF_LOCUS876	A0A0R3Q666	A0A0R3Q5E4	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A0R3Q666	BTMF_LOCUS8850	A0A0R3Q666	A0A0R3QSW4	Uncharacterized protein.	Phospholipase A(2).	0.456
A0A0R3Q8A0	A0A0R3Q666	A0A0R3Q8A0	A0A0R3Q666	Uncharacterized protein.	Uncharacterized protein.	0.687