STRINGSTRING
IQ63_00165 IQ63_00165 luxQ_2 luxQ_2 rsbU_9 rsbU_9 rsbV_5 rsbV_5 rsbP_6 rsbP_6 rsbV_6 rsbV_6 rsbU_8 rsbU_8 IQ63_00875 IQ63_00875 IQ63_02065 IQ63_02065 IQ63_02075 IQ63_02075 IQ63_02545 IQ63_02545 gmr_2 gmr_2 IQ63_06190 IQ63_06190 IQ63_07910 IQ63_07910 IQ63_08380 IQ63_08380 sigF_2 sigF_2 IQ63_10775 IQ63_10775 yeaP yeaP rsbV_3 rsbV_3 IQ63_12015 IQ63_12015 IQ63_12395 IQ63_12395 IQ63_12590 IQ63_12590 IQ63_12740 IQ63_12740 frzE frzE IQ63_13305 IQ63_13305 IQ63_14060 IQ63_14060 spoIIAA spoIIAA IQ63_15380 IQ63_15380 IQ63_15540 IQ63_15540 IQ63_16125 IQ63_16125 rsbU_4 rsbU_4 IQ63_16825 IQ63_16825 IQ63_17335 IQ63_17335 rsbP_4 rsbP_4 dcuS_2 dcuS_2 IQ63_20275 IQ63_20275 IQ63_20800 IQ63_20800 IQ63_21920 IQ63_21920 IQ63_22765 IQ63_22765 rsbV_4-2 rsbV_4-2 rsbP_2 rsbP_2 IQ63_23910 IQ63_23910 IQ63_24205 IQ63_24205 IQ63_24680 IQ63_24680 cph2_1 cph2_1 rsbW_1-2 rsbW_1-2 rsbP_3 rsbP_3 IQ63_25905 IQ63_25905 IQ63_26665 IQ63_26665 gmr_1 gmr_1 yegE yegE IQ63_30190 IQ63_30190 IQ63_30940 IQ63_30940 luxQ_1 luxQ_1 IQ63_31810 IQ63_31810 rsbU_5 rsbU_5 IQ63_32465 IQ63_32465 rsbV_1 rsbV_1 IQ63_33255 IQ63_33255 rsbU_1 rsbU_1 rsbV_2 rsbV_2 rsbU_2 rsbU_2 IQ63_36850 IQ63_36850 IQ63_37250 IQ63_37250 rsbV_7 rsbV_7 cheR2 cheR2 IQ63_37915 IQ63_37915 IQ63_38050 IQ63_38050 IQ63_41990 IQ63_41990 rsbU_3 rsbU_3 IQ63_43755 IQ63_43755
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IQ63_00165Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
luxQ_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1778 aa)
rsbU_9Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (868 aa)
rsbV_5Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (124 aa)
rsbP_6PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)
rsbV_6Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (150 aa)
rsbU_8PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (697 aa)
IQ63_00875PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
IQ63_02065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
IQ63_02075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
IQ63_02545Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
gmr_2Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (986 aa)
IQ63_06190Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
IQ63_07910Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
IQ63_08380Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
sigF_2RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (290 aa)
IQ63_10775Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
yeaPDiguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
rsbV_3Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (127 aa)
IQ63_12015Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
IQ63_12395Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
IQ63_12590Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
IQ63_12740Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
frzEProtein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
IQ63_13305Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
IQ63_14060Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
spoIIAAAnti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (107 aa)
IQ63_15380ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
IQ63_15540Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
IQ63_16125Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
rsbU_4Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
IQ63_16825Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
IQ63_17335ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
rsbP_4PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)
dcuS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)
IQ63_20275Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
IQ63_20800Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
IQ63_21920ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
IQ63_22765Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
rsbV_4-2Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (127 aa)
rsbP_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1058 aa)
IQ63_23910Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
IQ63_24205Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
IQ63_24680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
cph2_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
rsbW_1-2ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
rsbP_3Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
IQ63_25905Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1583 aa)
IQ63_26665Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
gmr_1Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (711 aa)
yegEProtein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (968 aa)
IQ63_30190Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
IQ63_30940Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
luxQ_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1318 aa)
IQ63_31810ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
rsbU_5PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)
IQ63_32465Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
rsbV_1Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (119 aa)
IQ63_33255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
rsbU_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
rsbV_2anti-sigma-B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (121 aa)
rsbU_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (788 aa)
IQ63_36850Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
IQ63_37250Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
rsbV_7Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (128 aa)
cheR2Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)
IQ63_37915Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
IQ63_38050Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
IQ63_41990ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1354 aa)
rsbU_3PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (810 aa)
IQ63_43755Flagellar basal body P-ring biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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