STRINGSTRING
phoP phoP regX3_5 regX3_5 regX3_4 regX3_4 nreC_7 nreC_7 liaR_5 liaR_5 citT_1 citT_1 tcrA_2 tcrA_2 kdpE_2 kdpE_2 degU_11 degU_11 tcrX_3 tcrX_3 tcrX_4 tcrX_4 degU_1 degU_1 degU_2 degU_2 vraR_1 vraR_1 liaR_11 liaR_11 regX3_1 regX3_1 nreC_6 nreC_6 degU_13 degU_13 degU_4 degU_4 liaR_16 liaR_16 liaR_17 liaR_17 mprA_2 mprA_2 yycF_2 yycF_2 liaR_3 liaR_3 prrA prrA liaR_12 liaR_12 citT_2 citT_2 mprA_5 mprA_5 mprA_6 mprA_6 luxQ_1 luxQ_1 regX3_3 regX3_3 cseB_1 cseB_1 degU_14 degU_14 regX3_2 regX3_2 vraR_2 vraR_2 vraR_6 vraR_6 nreC_5 nreC_5 degU_10 degU_10 degU_18 degU_18 IQ63_26555 IQ63_26555 vraR_10 vraR_10 liaR_15 liaR_15 tcrX_6 tcrX_6 czcR czcR devR_2 devR_2 mprA_3 mprA_3 kdpE_1 kdpE_1 degU_15 degU_15 vraR_7 vraR_7 pdtaR pdtaR tcrX_2 tcrX_2 trxB_2 trxB_2 vraR_5 vraR_5 cseB_2 cseB_2 degU_9 degU_9 IQ63_25905 IQ63_25905 degU_8 degU_8 IQ63_06375 IQ63_06375 liaR_8 liaR_8 mtrA mtrA degU_17 degU_17 nreC_9 nreC_9 degU_16 degU_16 narL_2 narL_2 nreC_3 nreC_3 nreC_8 nreC_8 liaR_9 liaR_9 dpiA dpiA cusR cusR uhpA uhpA degU_12 degU_12 luxQ_2 luxQ_2 pleD pleD degU_5 degU_5 liaR_1 liaR_1 devR_1 devR_1 tcrX_1 tcrX_1 mprA_1 mprA_1 tcrA_1 tcrA_1 yycF_1 yycF_1 nreC_2 nreC_2 tcsR tcsR degU_17-2 degU_17-2 regX3_7 regX3_7 IQ63_37965 IQ63_37965 afsQ1_2 afsQ1_2 srrA_1 srrA_1 degU_6 degU_6 degU_7 degU_7 frzE frzE lytR lytR liaR_4 liaR_4 cseB_3 cseB_3 liaR_7 liaR_7 afsQ1_1 afsQ1_1 minD minD nreC_4 nreC_4 vraR_9 vraR_9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phoPChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
regX3_5Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
regX3_4Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
nreC_7Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
liaR_5LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
citT_1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
tcrA_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
kdpE_2Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
degU_11LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
tcrX_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
tcrX_4Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
degU_1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
degU_2LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
vraR_1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
liaR_11LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
regX3_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
nreC_6LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
degU_13LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
degU_4LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
liaR_16LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
liaR_17LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
mprA_2Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
yycF_2Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
liaR_3LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
prrATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
liaR_12LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
citT_2Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
mprA_5Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
mprA_6Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
luxQ_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1318 aa)
regX3_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
cseB_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
degU_14LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
regX3_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
vraR_2LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
vraR_6LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
nreC_5LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
degU_10LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
degU_18LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
IQ63_26555LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (911 aa)
vraR_10LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
liaR_15LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
tcrX_6Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
czcRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
devR_2LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
mprA_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
kdpE_1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
degU_15LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
vraR_7LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
pdtaRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
tcrX_2Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
trxB_2Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
vraR_5LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
cseB_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
degU_9LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
IQ63_25905Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1583 aa)
degU_8Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
IQ63_06375Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
liaR_8LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
mtrATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
degU_17Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
nreC_9LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
degU_16Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
narL_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
nreC_3LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
nreC_8LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
liaR_9LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
dpiAChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
cusRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
uhpATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
degU_12Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
luxQ_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1778 aa)
pleDHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
degU_5LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
liaR_1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
devR_1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
tcrX_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
mprA_1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
tcrA_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
yycF_1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
nreC_2LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
tcsRLuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
degU_17-2MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
regX3_7XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
IQ63_37965Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
afsQ1_2Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
srrA_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
degU_6LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
degU_7LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
frzEProtein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
lytRLytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
liaR_4LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
cseB_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
liaR_7LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
afsQ1_1Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
minDSeptum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
nreC_4Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
vraR_9MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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