STRINGSTRING
baeS_6 baeS_6 IQ63_08380 IQ63_08380 narX_7 narX_7 cseC_2 cseC_2 degS_1 degS_1 baeS_2 baeS_2 zraS zraS IQ63_10605 IQ63_10605 IQ63_12015 IQ63_12015 IQ63_12395 IQ63_12395 IQ63_12740 IQ63_12740 nreB_2 nreB_2 yehU yehU IQ63_13305 IQ63_13305 IQ63_13420 IQ63_13420 IQ63_14060 IQ63_14060 IQ63_15380 IQ63_15380 IQ63_16125 IQ63_16125 mprB_1 mprB_1 IQ63_16825 IQ63_16825 IQ63_17020 IQ63_17020 IQ63_17770 IQ63_17770 rsbP_4 rsbP_4 dcuS_2 dcuS_2 IQ63_20275 IQ63_20275 IQ63_20800 IQ63_20800 IQ63_21410 IQ63_21410 tcrY_4 tcrY_4 tcrY_6 tcrY_6 IQ63_21920 IQ63_21920 kdpD kdpD cusS_2 cusS_2 dcuS_1 dcuS_1 gyrB gyrB nreB_4 nreB_4 baeS_5 baeS_5 arlS_2 arlS_2 IQ63_22765 IQ63_22765 IQ63_22900 IQ63_22900 baeS_5-2 baeS_5-2 pdtaS pdtaS rsbP_2 rsbP_2 IQ63_23910 IQ63_23910 rsbP_5 rsbP_5 liaS_7 liaS_7 IQ63_24680 IQ63_24680 mtrB_1 mtrB_1 tcrY_3 tcrY_3 gyrBR gyrBR rsbW_1-2 rsbW_1-2 IQ63_25775 IQ63_25775 tcrY_8 tcrY_8 IQ63_26665 IQ63_26665 rsbU_7 rsbU_7 IQ63_27965 IQ63_27965 IQ63_28385 IQ63_28385 desK_11 desK_11 rsbP_1 rsbP_1 baeS_1 baeS_1 cseC_1 cseC_1 IQ63_30180 IQ63_30180 IQ63_30190 IQ63_30190 IQ63_30940 IQ63_30940 arlS_1 arlS_1 IQ63_31255 IQ63_31255 luxQ_1 luxQ_1 mprB_2 mprB_2 IQ63_31810 IQ63_31810 nreB_3 nreB_3 rsbU_5 rsbU_5 nreB_1 nreB_1 IQ63_32980 IQ63_32980 dosT_1 dosT_1 rsbU_1 rsbU_1 tcrY_1 tcrY_1 tcrY_2 tcrY_2 rsbU_2 rsbU_2 phoR phoR walK walK IQ63_36345 IQ63_36345 IQ63_36850 IQ63_36850 IQ63_37250 IQ63_37250 senX3 senX3 IQ63_37915 IQ63_37915 mtrB_2 mtrB_2 comP_1 comP_1 IQ63_39760 IQ63_39760 htpG_2 htpG_2 desK_12 desK_12 comP_2 comP_2 IQ63_41535 IQ63_41535 liaS_16 liaS_16 rstB rstB cusS_1 cusS_1 desK_4 desK_4 dcuS_4 dcuS_4 IQ63_05565 IQ63_05565 mtrB_3 mtrB_3 liaS_5 liaS_5 htpG_1 htpG_1 IQ63_03175 IQ63_03175 IQ63_03155 IQ63_03155 IQ63_02545 IQ63_02545 degS_2 degS_2 dcuS_3 dcuS_3 tcrY_5 tcrY_5 IQ63_02075 IQ63_02075 IQ63_02065 IQ63_02065 IQ63_00875 IQ63_00875 cseC_4 cseC_4 IQ63_04420 IQ63_04420 rsbP_6 rsbP_6 rsbU_9 rsbU_9 luxQ_2 luxQ_2 IQ63_00260 IQ63_00260 IQ63_00165 IQ63_00165
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
baeS_6Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
IQ63_08380Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
narX_7Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
cseC_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
degS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
baeS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
zraSHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
IQ63_10605Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
IQ63_12015Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
IQ63_12395Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
IQ63_12740Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
nreB_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
yehUHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
IQ63_13305Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
IQ63_13420Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
IQ63_14060Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
IQ63_15380ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
IQ63_16125Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
mprB_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
IQ63_16825Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
IQ63_17020Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
IQ63_17770Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
rsbP_4PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)
dcuS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)
IQ63_20275Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
IQ63_20800Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
IQ63_21410Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (872 aa)
tcrY_4Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
tcrY_6Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
IQ63_21920ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
kdpDHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (894 aa)
cusS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
dcuS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
gyrBDNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
nreB_4Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
baeS_5Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
arlS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
IQ63_22765Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
IQ63_22900Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1062 aa)
baeS_5-2ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
pdtaSATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
rsbP_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1058 aa)
IQ63_23910Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
rsbP_5Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
liaS_7Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
IQ63_24680Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
mtrB_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
tcrY_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
gyrBRDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (687 aa)
rsbW_1-2ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
IQ63_25775Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
tcrY_8Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
IQ63_26665Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
rsbU_7PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
IQ63_27965Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
IQ63_28385ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (840 aa)
desK_11Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
rsbP_1Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (692 aa)
baeS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
cseC_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
IQ63_30180Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (721 aa)
IQ63_30190Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
IQ63_30940Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
arlS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
IQ63_31255Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
luxQ_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1318 aa)
mprB_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
IQ63_31810ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
nreB_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
rsbU_5PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)
nreB_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
IQ63_32980Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
dosT_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
rsbU_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
tcrY_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
tcrY_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
rsbU_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (788 aa)
phoRHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
walKHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
IQ63_36345Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (894 aa)
IQ63_36850Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
IQ63_37250Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
senX3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
IQ63_37915Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
mtrB_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
comP_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
IQ63_39760Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
htpG_2Heat shock protein 90; Molecular chaperone. Has ATPase activity. (610 aa)
desK_12Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
comP_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
IQ63_41535ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
liaS_16Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
rstBHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
cusS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
desK_4Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
dcuS_4ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
IQ63_05565Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
mtrB_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
liaS_5Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
htpG_1Heat shock protein 90; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
IQ63_03175Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1270 aa)
IQ63_03155ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1055 aa)
IQ63_02545Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
degS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
dcuS_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
tcrY_5Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
IQ63_02075Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
IQ63_02065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
IQ63_00875PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
cseC_4ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
IQ63_04420Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (635 aa)
rsbP_6PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)
rsbU_9Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (868 aa)
luxQ_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1778 aa)
IQ63_00260Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
IQ63_00165Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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