STRINGSTRING
IQ63_20355 IQ63_20355 iclR_5 iclR_5 allR_1 allR_1 dcuS_2 dcuS_2 rsbP_4 rsbP_4 rsbU_4 rsbU_4 IQ63_44735 IQ63_44735 iclR_2 iclR_2 liaS_16 liaS_16 iclR_4 iclR_4 luxQ_2 luxQ_2 rsbU_9 rsbU_9 rsbP_6 rsbP_6 rsbU_8 rsbU_8 rmhR rmhR pobR_2 pobR_2 iclR_6 iclR_6 vraR_4 vraR_4 IQ63_11040 IQ63_11040 kipR_2 kipR_2 yeaP yeaP pcaR_2 pcaR_2 rsbU_3 rsbU_3 kipR_3 kipR_3 IQ63_41360 IQ63_41360 kdgR_2 kdgR_2 kdgR_4 kdgR_4 pcaU pcaU iclR_3 iclR_3 pcaR_2-2 pcaR_2-2 kdgR_1 kdgR_1 IQ63_37515 IQ63_37515 IQ63_37510 IQ63_37510 gylR gylR rsbU_2 rsbU_2 IQ63_33770 IQ63_33770 devS_1 devS_1 dosT_1 dosT_1 IQ63_32380 IQ63_32380 rsbU_5 rsbU_5 luxQ_1 luxQ_1 IQ63_31255 IQ63_31255 hrcA hrcA dosT_3 dosT_3 kdgR_5 kdgR_5 yegE yegE rsbP_1 rsbP_1 acoR_3 acoR_3 rsbP_3 rsbP_3 pobR_1 pobR_1 cph2_1 cph2_1 rsbP_5 rsbP_5 IQ63_23945 IQ63_23945 rsbP_2 rsbP_2 acoR_2 acoR_2 iclR_1 iclR_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IQ63_20355Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
iclR_5IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
allR_1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
dcuS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)
rsbP_4PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)
rsbU_4Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
IQ63_44735Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
iclR_2IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
liaS_16Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
iclR_4IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
luxQ_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1778 aa)
rsbU_9Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (868 aa)
rsbP_6PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)
rsbU_8PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (697 aa)
rmhRIclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
pobR_2IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
iclR_6IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
vraR_4Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
IQ63_11040Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
kipR_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
yeaPDiguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
pcaR_2IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)
rsbU_3PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (810 aa)
kipR_3IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
IQ63_41360Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
kdgR_2IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
kdgR_4IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
pcaUIclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
iclR_3IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
pcaR_2-2IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
kdgR_1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
IQ63_37515RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
IQ63_37510Cell wall protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
gylRIclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
rsbU_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (788 aa)
IQ63_33770Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
devS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
dosT_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
IQ63_32380Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
rsbU_5PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)
luxQ_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1318 aa)
IQ63_31255Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
hrcAHrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (338 aa)
dosT_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
kdgR_5IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
yegEProtein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (968 aa)
rsbP_1Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (692 aa)
acoR_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
rsbP_3Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
pobR_1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
cph2_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
rsbP_5Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
IQ63_23945Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
rsbP_2PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1058 aa)
acoR_2Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
iclR_1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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