STRINGSTRING
czcR czcR regX3_1 regX3_1 srrA_1 srrA_1 mtrB_2 mtrB_2 afsQ1_2 afsQ1_2 regX3_7 regX3_7 yycF_1 yycF_1 phoR phoR tcrA_1 tcrA_1 mprA_1 mprA_1 tcrY_2 tcrY_2 tcrY_1 tcrY_1 tcrX_1 tcrX_1 mprA_5 mprA_5 mprA_6 mprA_6 mprB_2 mprB_2 luxQ_1 luxQ_1 regX3_3 regX3_3 arlS_1 arlS_1 cseC_1 cseC_1 cseB_1 cseB_1 baeS_1 baeS_1 regX3_2 regX3_2 IQ63_26555 IQ63_26555 tcrY_8 tcrY_8 tcrX_6 tcrX_6 tcrY_3 tcrY_3 tcrX_2 tcrX_2 mtrB_1 mtrB_1 afsQ1_1 afsQ1_1 baeS_5-2 baeS_5-2 phoP phoP regX3_5 regX3_5 arlS_2 arlS_2 regX3_4 regX3_4 baeS_5 baeS_5 citT_1 citT_1 tcrA_2 tcrA_2 cusS_2 cusS_2 kdpE_2 kdpE_2 tcrY_4 tcrY_4 tcrX_3 tcrX_3 tcrX_4 tcrX_4 baeS_6 baeS_6 cseB_3 cseB_3 kdpE_1 kdpE_1 mprA_3 mprA_3 mprB_1 mprB_1 mprA_2 mprA_2 baeS_2 baeS_2 cseB_2 cseB_2 mtrA mtrA mtrB_3 mtrB_3 dpiA dpiA tcrY_5 tcrY_5 cusR cusR luxQ_2 luxQ_2 citT_2 citT_2 prrA prrA yycF_2 yycF_2 rstB rstB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
czcRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
regX3_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
srrA_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
mtrB_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
afsQ1_2Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
regX3_7XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
yycF_1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
phoRHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
tcrA_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
mprA_1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
tcrY_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
tcrY_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
tcrX_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
mprA_5Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
mprA_6Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
mprB_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
luxQ_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1318 aa)
regX3_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
arlS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
cseC_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
cseB_1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
baeS_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
regX3_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
IQ63_26555LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (911 aa)
tcrY_8Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
tcrX_6Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
tcrY_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
tcrX_2Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
mtrB_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
afsQ1_1Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
baeS_5-2ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
phoPChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
regX3_5Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
arlS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
regX3_4Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
baeS_5Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
citT_1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
tcrA_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
cusS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
kdpE_2Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
tcrY_4Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
tcrX_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
tcrX_4Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
baeS_6Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
cseB_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
kdpE_1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
mprA_3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
mprB_1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
mprA_2Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
baeS_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
cseB_2Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
mtrATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
mtrB_3Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
dpiAChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
tcrY_5Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
cusRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
luxQ_2Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1778 aa)
citT_2Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
prrATranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
yycF_2Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
rstBHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
Your Current Organism:
Streptomyces acidiscabies
NCBI taxonomy Id: 42234
Other names: ATCC 49003, DSM 41668, ICMP 12536, JCM 7913, KCTC 9736, LMG 19856, LMG:19856, NRRL B-16524, S. acidiscabies, Streptomyces acidiscabiei, strain RL-110
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