(10 nodes) Mixed, incl. Ferric iron binding, and Tetrapyrrole catabolic process network (Nitrospira moscoviensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALA56932.1	Homologs of previously reported genes of unknown function. (169 aa)
	ALA56933.1	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (460 aa)
	bfrB	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (158 aa)
	bfrA	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa)
	ALA58954.1	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (177 aa)
	ALA59108.1	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (213 aa)
	ALA59344.1	Hypothetical protein; Homologs of previously reported genes of unknown function. (177 aa)
	nifA	Nif-specific regulatory protein NifA. (508 aa)
	ALA60906.1	Exported protein of unknown function; No homology to any previously reported sequences. (213 aa)
	ALA60909.1	Hypothetical protein; No homology to any previously reported sequences. (114 aa)

Your Current Organism:

Nitrospira moscoviensis

NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALA56932.1	ALA56933.1	NITMOv2_0496	NITMOv2_0497	Homologs of previously reported genes of unknown function.	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.544
ALA56933.1	ALA56932.1	NITMOv2_0497	NITMOv2_0496	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Homologs of previously reported genes of unknown function.	0.544
ALA56933.1	ALA59108.1	NITMOv2_0497	NITMOv2_2697	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.900
ALA56933.1	ALA59344.1	NITMOv2_0497	NITMOv2_2939	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Hypothetical protein; Homologs of previously reported genes of unknown function.	0.900
ALA58954.1	ALA59108.1	NITMOv2_2541	NITMOv2_2697	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.901
ALA58954.1	ALA59344.1	NITMOv2_2541	NITMOv2_2939	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	Hypothetical protein; Homologs of previously reported genes of unknown function.	0.900
ALA58954.1	ALA60906.1	NITMOv2_2541	NITMOv2_4532	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	Exported protein of unknown function; No homology to any previously reported sequences.	0.479
ALA58954.1	bfrA	NITMOv2_2541	NITMOv2_0877	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.924
ALA58954.1	bfrB	NITMOv2_2541	NITMOv2_0876	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.924
ALA59108.1	ALA56933.1	NITMOv2_2697	NITMOv2_0497	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.900
ALA59108.1	ALA58954.1	NITMOv2_2697	NITMOv2_2541	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	0.901
ALA59108.1	ALA59344.1	NITMOv2_2697	NITMOv2_2939	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Hypothetical protein; Homologs of previously reported genes of unknown function.	0.900
ALA59108.1	bfrA	NITMOv2_2697	NITMOv2_0877	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.901
ALA59108.1	bfrB	NITMOv2_2697	NITMOv2_0876	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.901
ALA59344.1	ALA56933.1	NITMOv2_2939	NITMOv2_0497	Hypothetical protein; Homologs of previously reported genes of unknown function.	Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.900
ALA59344.1	ALA58954.1	NITMOv2_2939	NITMOv2_2541	Hypothetical protein; Homologs of previously reported genes of unknown function.	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	0.900
ALA59344.1	ALA59108.1	NITMOv2_2939	NITMOv2_2697	Hypothetical protein; Homologs of previously reported genes of unknown function.	Putative Heme oxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.900
ALA59344.1	bfrA	NITMOv2_2939	NITMOv2_0877	Hypothetical protein; Homologs of previously reported genes of unknown function.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.900
ALA59344.1	bfrB	NITMOv2_2939	NITMOv2_0876	Hypothetical protein; Homologs of previously reported genes of unknown function.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.900
ALA60906.1	ALA58954.1	NITMOv2_4532	NITMOv2_2541	Exported protein of unknown function; No homology to any previously reported sequences.	Putative Bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.	0.479