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AHY47973.1 AHY47973.1 AHY45587.1 AHY45587.1 AHY45573.1 AHY45573.1 AHY45572.1 AHY45572.1 AHY45571.1 AHY45571.1 AHY45570.1 AHY45570.1 AHY45569.1 AHY45569.1 AHY45523.1 AHY45523.1 AHY46262.1 AHY46262.1 AHY46263.1 AHY46263.1 AHY46264.1 AHY46264.1 AHY46300.1 AHY46300.1 AHY46384.1 AHY46384.1 AHY46494.1 AHY46494.1 AHY46629.1 AHY46629.1 AHY46630.1 AHY46630.1 nuoN nuoN AHY46849.1 AHY46849.1 AHY46850.1 AHY46850.1 nuoK nuoK AHY46852.1 AHY46852.1 nuoD nuoD AHY46856.1 AHY46856.1 nuoB nuoB nuoA nuoA AHY47294.1 AHY47294.1 AHY47330.1 AHY47330.1 AHY46258.1 AHY46258.1 AHY46240.1 AHY46240.1 AHY46105.1 AHY46105.1 AHY47345.1 AHY47345.1 AHY47513.1 AHY47513.1 AHY47545.1 AHY47545.1 AHY47546.1 AHY47546.1 AHY47651.1 AHY47651.1 AHY47672.1 AHY47672.1 AHY47722.1 AHY47722.1 AHY45296.1 AHY45296.1 AHY45297.1 AHY45297.1 AHY46062.1 AHY46062.1 AHY47854.1 AHY47854.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHY47973.1PRC-barrel domain; COG:COG5271: AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]; Pfam:PF05239:PRC-barrel domain; SUPERFAMILY:SSF50346:PRC-barrel-like. (308 aa)
AHY45587.1Respiratory-chain NADH dehydrogenase 24 Kd subunit; COG:COG3411: Ferredoxin [Energy production and conversion]; Pfam:PF01257:Thioredoxin-like 2Fe-2S ferredoxin; SUPERFAMILY:SSF52833:Thioredoxin-like fold. (112 aa)
AHY45573.1COG:COG1271: Cytochrome bd-type quinol oxidase subunit 1 [Energy production and conversion]; Pfam:PF01654:Cytochrome d ubiquinol oxidase, subunit I. (445 aa)
AHY45572.1COG:COG1290: Cytochrome b subunit of the bc complex [Energy production and conversion]; Pfam:PF00032:Cytochrome b/b6, C-terminal; ProSiteProfiles:PS51003:Cytochrome b/b6, C-terminal; SUPERFAMILY:SSF81648:Cytochrome b/b6, C-terminal. (167 aa)
AHY45571.1COG:COG1290: Cytochrome b subunit of the bc complex [Energy production and conversion]; Pfam:PF13631:Cytochrome b/b6, N-terminal; ProSiteProfiles:PS51002:Cytochrome b/b6, N-terminal; SUPERFAMILY:SSF81342:Di-haem cytochrome, transmembrane. (279 aa)
AHY45570.1Rieske [2Fe-2S] domain; COG:COG0723: Rieske Fe-S protein [Energy production and conversion]; Pfam:PF00355:Rieske [2Fe-2S] iron-sulphur domain; PRINTS:PR00162:Rieske iron-sulphur protein, C-terminal; ProSiteProfiles:PS51296:Rieske [2Fe-2S] iron-sulphur domain; SUPERFAMILY:SSF50022:Rieske [2Fe-2S] iron-sulphur domain. (235 aa)
AHY45569.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (450 aa)
AHY45523.1Respiratory-chain NADH dehydrogenase 51 Kd subunit; COG:COG4656: Predicted NADH:ubiquinone oxidoreductase subunit RnfC [Energy production and conversion]; Pfam:PF01512:NADH:ubiquinone oxidoreductase, 51kDa subunit; SUPERFAMILY:SSF142019:No Description. (370 aa)
AHY46262.1COG:COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; PRINTS:PR01434:NADH-ubiquinone oxidoreductase chain 5 signature. (592 aa)
AHY46263.1COG:COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; PRINTS:PR01434:NADH-ubiquinone oxidoreductase chain 5 signature. (499 aa)
AHY46264.1COG:COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; PRINTS:PR01437:NADH:ubiquinone oxidoreductase. (519 aa)
AHY46300.1COG:COG2311: Predicted membrane protein [Function unknown]; Pfam:PF04235:Domain of unknown function DUF418; Pfam:PF04235:Domain of unknown function DUF418. (435 aa)
AHY46384.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF52833:Thioredoxin-like fold. (91 aa)
AHY46494.1TIGRFAM:TIGR02271:Domain of unknown function DUF2382; COG:COG3861: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF09557:Domain of unknown function DUF2382; SUPERFAMILY:SSF50346:PRC-barrel-like. (352 aa)
AHY46629.1COG:COG1271: Cytochrome bd-type quinol oxidase subunit 1 [Energy production and conversion]; Pfam:PF01654:Cytochrome d ubiquinol oxidase, subunit I; Pfam:PF01654:Cytochrome d ubiquinol oxidase, subunit I; PIRSF:PIRSF006446:Cytochrome d ubiquinol oxidase, subunit I. (504 aa)
AHY46630.1COG:COG1294: Cytochrome bd-type quinol oxidase subunit 2 [Energy production and conversion]; Pfam:PF02322:Cytochrome d ubiquinol oxidase, subunit II; Pfam:PF02322:Cytochrome d ubiquinol oxidase, subunit II. (352 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (481 aa)
AHY46849.1TIGRFAM:TIGR01972:NADH-quinone oxidoreductase, chain M/4; COG:COG1008: NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; PRINTS:PR01437:NADH:ubiquinone oxidoreductase; NDH_I_M. (485 aa)
AHY46850.1TIGRFAM:TIGR01974:NADH-plastoquinone oxidoreductase, chain 5; COG:COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit [Energy production and conversion. (661 aa)
nuoKNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (112 aa)
AHY46852.1NADH:ubiquinone oxidoreductase subunit 6 (chain J); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (191 aa)
nuoDNADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (396 aa)
AHY46856.1COG:COG0852: NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion]; Pfam:PF00329:NADH:ubiquinone oxidoreductase, 30kDa subunit; Pfam:PF00329:NADH:ubiquinone oxidoreductase, 30kDa subunit; SUPERFAMILY:SSF143243:No Description. (163 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (288 aa)
nuoANADH:ubiquinone oxidoreductase subunit 3 (chain A); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (132 aa)
AHY47294.1NAD(P)Hquinone oxidoreductase, type IV; TIGRFAM:TIGR01755:Flavoprotein WrbA; COG:COG0655: Multimeric flavodoxin WrbA [General function prediction only]; Pfam:PF03358:NADPH-dependent FMN reductase; ProSiteProfiles:PS50902:Flavodoxin/nitric oxide synthase; SUPERFAMILY:SSF52218:No Description; flav_wrbA; Belongs to the WrbA family. (201 aa)
AHY47330.1Molybdopterin oxidoreductase; COG:COG0243: Anaerobic dehydrogenases typically selenocysteine-containing [Energy production and conversion]; Pfam:PF00384:Molybdopterin oxidoreductase; SMART:SM00926:Molybdopterin oxidoreductase, 4Fe-4S domain; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (965 aa)
AHY46258.1COG:COG0651: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; Pfam:PF00361:NADH:ubiquinone/plastoquinone oxidoreductase; PRINTS:PR01437:NADH:ubiquinone oxidoreductase. (464 aa)
AHY46240.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (156 aa)
AHY46105.14Fe-4S dicluster domain; COG:COG4231: Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits [Energy production and conversion]; Pfam:PF13187:4Fe-4S ferredoxin-type, iron-sulpur binding domain; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description. (87 aa)
AHY47345.1Pyridine nucleotide-disulfide oxidoreductase; COG:COG1251: NAD(P)H-nitrite reductase [Energy production and conversion]; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; PRINTS:PR00368:FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SUPERFAMILY:SSF51905:No Description. (394 aa)
AHY47513.1COG:COG2311: Predicted membrane protein [Function unknown]; Pfam:PF04235:Domain of unknown function DUF418; Pfam:PF04235:Domain of unknown function DUF418. (393 aa)
AHY47545.1COG:COG0277: FAD/FMN-containing dehydrogenases [Energy production and conversion]; Pfam:PF01565:FAD linked oxidase, N-terminal; Pfam:PF01565:FAD linked oxidase, N-terminal; ProSiteProfiles:PS51387:FAD-binding, type 2; SUPERFAMILY:SSF56176:FAD-binding, type 2. (423 aa)
AHY47546.1COG:COG0277: FAD/FMN-containing dehydrogenases [Energy production and conversion]; Pfam:PF02913:FAD-linked oxidase, C-terminal; Pfam:PF02913:FAD-linked oxidase, C-terminal; ProSiteProfiles:PS51387:FAD-binding, type 2; SUPERFAMILY:SSF56176:FAD-binding, type 2. (493 aa)
AHY47651.1Ferredoxin; COG:COG0633: Ferredoxin [Energy production and conversion]; Pfam:PF00111:2Fe-2S ferredoxin-type domain; Pfam:PF00111:2Fe-2S ferredoxin-type domain; ProSiteProfiles:PS51085:2Fe-2S ferredoxin-type domain; SUPERFAMILY:SSF54292:2Fe-2S ferredoxin-type domain. (89 aa)
AHY47672.1Flavodoxin; COG:COG0369: Sulfite reductase alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]; Pfam:PF00258:Flavodoxin/nitric oxide synthase; PRINTS:PR00369:Flavodoxin; ProSiteProfiles:PS50902:Flavodoxin/nitric oxide synthase; SUPERFAMILY:SSF52218:No Description. (155 aa)
AHY47722.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (79 aa)
AHY45296.1COG:COG1053: Succinate dehydrogenase/fumarate reductase flavoprotein subunit [Energy production and conversion]; Pfam:PF00890:FAD binding domain; Pfam:PF00890:FAD binding domain; SUPERFAMILY:SSF51905:No Description. (562 aa)
AHY45297.1TIGRFAM:TIGR00384:Succinate dehydrogenase/fumarate reductase iron-sulphur protein; COG:COG0479: Succinate dehydrogenase/fumarate reductase Fe-S protein subunit [Energy production and conversion]; Pfam:PF13085:Succinate dehydogenase/fumarate reductase N-terminal; ProSitePatterns:PS00197:2Fe-2S ferredoxin, iron-sulphur binding site; ProSiteProfiles:PS51085:2Fe-2S ferredoxin-type domain; SUPERFAMILY:SSF54292:2Fe-2S ferredoxin-type domain. (285 aa)
AHY46062.1Copper binding protein, plastocyanin/azurin family; COG:COG3794: Plastocyanin [Energy production and conversion]; Pfam:PF00127:Blue (type 1) copper domain; PRINTS:PR00155:Amicyanin; SUPERFAMILY:SSF49503:Cupredoxin. (163 aa)
AHY47854.1Molybdopterin oxidoreductase; COG:COG3383: Uncharacterized anaerobic dehydrogenase [General function prediction only]; Pfam:PF00384:Molybdopterin oxidoreductase; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (863 aa)
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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