(6 nodes) SMARCC, C-terminal, and SWI/SNF complex network (Helianthus annuus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHB3	Putative DNA-binding family protein. (920 aa)
	LFR	Putative ARM repeat superfamily protein. (461 aa)
	CHC1	Putative SWIB/MDM2 domain superfamily protein. (520 aa)
	A0A251TZW7	Putative homeodomain-like protein. (684 aa)
	BSH	Putative transcription regulatory protein SNF5, putative (BSH). (237 aa)
	A0A251VT43	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase. (368 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251TZW7	A0A251VT43	A0A251TZW7	A0A251VT43	Putative homeodomain-like protein.	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	0.945
A0A251TZW7	BSH	A0A251TZW7	A0A251UR19	Putative homeodomain-like protein.	Putative transcription regulatory protein SNF5, putative (BSH).	0.969
A0A251TZW7	CHB3	A0A251TZW7	A0A251RX19	Putative homeodomain-like protein.	Putative DNA-binding family protein.	0.552
A0A251TZW7	CHC1	A0A251TZW7	A0A251TWV5	Putative homeodomain-like protein.	Putative SWIB/MDM2 domain superfamily protein.	0.944
A0A251TZW7	LFR	A0A251TZW7	A0A251SXG3	Putative homeodomain-like protein.	Putative ARM repeat superfamily protein.	0.971
A0A251VT43	A0A251TZW7	A0A251VT43	A0A251TZW7	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	Putative homeodomain-like protein.	0.945
A0A251VT43	BSH	A0A251VT43	A0A251UR19	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	Putative transcription regulatory protein SNF5, putative (BSH).	0.788
A0A251VT43	CHB3	A0A251VT43	A0A251RX19	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	Putative DNA-binding family protein.	0.945
A0A251VT43	CHC1	A0A251VT43	A0A251TWV5	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	Putative SWIB/MDM2 domain superfamily protein.	0.856
A0A251VT43	LFR	A0A251VT43	A0A251SXG3	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	Putative ARM repeat superfamily protein.	0.850
BSH	A0A251TZW7	A0A251UR19	A0A251TZW7	Putative transcription regulatory protein SNF5, putative (BSH).	Putative homeodomain-like protein.	0.969
BSH	A0A251VT43	A0A251UR19	A0A251VT43	Putative transcription regulatory protein SNF5, putative (BSH).	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	0.788
BSH	CHB3	A0A251UR19	A0A251RX19	Putative transcription regulatory protein SNF5, putative (BSH).	Putative DNA-binding family protein.	0.967
BSH	CHC1	A0A251UR19	A0A251TWV5	Putative transcription regulatory protein SNF5, putative (BSH).	Putative SWIB/MDM2 domain superfamily protein.	0.971
BSH	LFR	A0A251UR19	A0A251SXG3	Putative transcription regulatory protein SNF5, putative (BSH).	Putative ARM repeat superfamily protein.	0.975
CHB3	A0A251TZW7	A0A251RX19	A0A251TZW7	Putative DNA-binding family protein.	Putative homeodomain-like protein.	0.552
CHB3	A0A251VT43	A0A251RX19	A0A251VT43	Putative DNA-binding family protein.	Putative SNF2-related domain, P-loop containing nucleoside triphosphate hydrolase.	0.945
CHB3	BSH	A0A251RX19	A0A251UR19	Putative DNA-binding family protein.	Putative transcription regulatory protein SNF5, putative (BSH).	0.967
CHB3	CHC1	A0A251RX19	A0A251TWV5	Putative DNA-binding family protein.	Putative SWIB/MDM2 domain superfamily protein.	0.944
CHB3	LFR	A0A251RX19	A0A251SXG3	Putative DNA-binding family protein.	Putative ARM repeat superfamily protein.	0.971