41 items (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251RPQ9	Putative ribosomal protein S8e family protein. (260 aa)
	A0A251RRQ8	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (405 aa)
	EIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	A0A251S1W9	Putative ribosomal RNA large subunit methyltransferase E. (67 aa)
	A0A251S5Y3	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
	NOG1	Putative nucleolar GTP-binding protein 1. (714 aa)
	A0A251SAD5	Putative ribosomal protein L1, 3-layer alpha/beta-sandwich. (439 aa)
	A0A251SKM1	Putative nucleolar complex protein 2. (696 aa)
	PESC	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (583 aa)
	A0A251SPL8	Putative nucleotide-binding alpha-beta plait domain-containing protein. (205 aa)
	A0A251SS27	Uncharacterized protein. (572 aa)
	A0A251SYX3	Putative ribosomal protein L24e family protein. (168 aa)
	A0A251T6F9	Putative ribosomal RNA processing Brix domain protein. (310 aa)
	A0A251TA48	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (671 aa)
	A0A251TAU8	Putative binding protein. (836 aa)
	A0A251TEZ9	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (609 aa)
	A0A251TH05	Putative GTP-binding family protein. (603 aa)
	A0A251TLQ8	RL10P_insert domain-containing protein. (139 aa)
	A0A251TNK7	Putative ribosomal RNA processing Brix domain protein. (310 aa)
	RLP24	Putative ribosome biogenesis protein RLP24. (133 aa)
	A0A251TQB6	Putative RNA-binding (RRM/RBD/RNP motifs) family protein. (208 aa)
	NSA2	Putative ribosome biogenesis protein. (260 aa)
	EBP2	Putative rRNA-processing protein ebp2. (287 aa)
	A0A251U9B9	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (716 aa)
	MEE49	Putative ribosomal RNA processing Brix domain protein. (333 aa)
	A0A251UCX9	Putative ftsJ-like methyltransferase family protein. (231 aa)
	A0A251UEE8	Uncharacterized protein. (191 aa)
	A0A251UGQ9	Protein MAK16 homolog; Belongs to the MAK16 family. (298 aa)
	A0A251UJW1	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (326 aa)
	A0A251UNE4	Putative rRNA processing protein-related protein. (293 aa)
	A0A251UR11	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
	A0A251USD9	Putative transducin/WD40 repeat-like superfamily protein. (483 aa)
	A0A251UZ92	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (582 aa)
	A0A251V1H5	Putative GTP-binding family protein. (375 aa)
	A0A251V2G2	Putative ribosomal protein L1, 2-layer alpha/beta-sandwich. (262 aa)
	MRT4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
	APUM24	Putative pumilio 24. (570 aa)
	A0A251VH76	Putative ribosomal RNA processing Brix domain protein. (340 aa)
	A0A251VIF1	Putative noc2p family. (749 aa)
	A0A251VRM7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
	A0A251VS04	Putative NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (607 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RPQ9	A0A251RRQ8	A0A251RPQ9	A0A251RRQ8	Putative ribosomal protein S8e family protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.982
A0A251RPQ9	A0A251S1W9	A0A251RPQ9	A0A251S1W9	Putative ribosomal protein S8e family protein.	Putative ribosomal RNA large subunit methyltransferase E.	0.938
A0A251RPQ9	A0A251S5Y3	A0A251RPQ9	A0A251S5Y3	Putative ribosomal protein S8e family protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.978
A0A251RPQ9	A0A251SAD5	A0A251RPQ9	A0A251SAD5	Putative ribosomal protein S8e family protein.	Putative ribosomal protein L1, 3-layer alpha/beta-sandwich.	0.902
A0A251RPQ9	A0A251SKM1	A0A251RPQ9	A0A251SKM1	Putative ribosomal protein S8e family protein.	Putative nucleolar complex protein 2.	0.968
A0A251RPQ9	A0A251SPL8	A0A251RPQ9	A0A251SPL8	Putative ribosomal protein S8e family protein.	Putative nucleotide-binding alpha-beta plait domain-containing protein.	0.959
A0A251RPQ9	A0A251SS27	A0A251RPQ9	A0A251SS27	Putative ribosomal protein S8e family protein.	Uncharacterized protein.	0.971
A0A251RPQ9	A0A251SYX3	A0A251RPQ9	A0A251SYX3	Putative ribosomal protein S8e family protein.	Putative ribosomal protein L24e family protein.	0.978
A0A251RPQ9	A0A251T6F9	A0A251RPQ9	A0A251T6F9	Putative ribosomal protein S8e family protein.	Putative ribosomal RNA processing Brix domain protein.	0.941
A0A251RPQ9	A0A251TA48	A0A251RPQ9	A0A251TA48	Putative ribosomal protein S8e family protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.971
A0A251RPQ9	A0A251TAU8	A0A251RPQ9	A0A251TAU8	Putative ribosomal protein S8e family protein.	Putative binding protein.	0.936
A0A251RPQ9	A0A251TEZ9	A0A251RPQ9	A0A251TEZ9	Putative ribosomal protein S8e family protein.	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.896
A0A251RPQ9	A0A251TH05	A0A251RPQ9	A0A251TH05	Putative ribosomal protein S8e family protein.	Putative GTP-binding family protein.	0.948
A0A251RPQ9	A0A251TLQ8	A0A251RPQ9	A0A251TLQ8	Putative ribosomal protein S8e family protein.	RL10P_insert domain-containing protein.	0.964
A0A251RPQ9	A0A251TNK7	A0A251RPQ9	A0A251TNK7	Putative ribosomal protein S8e family protein.	Putative ribosomal RNA processing Brix domain protein.	0.941
A0A251RPQ9	A0A251TQB6	A0A251RPQ9	A0A251TQB6	Putative ribosomal protein S8e family protein.	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	0.959
A0A251RPQ9	A0A251U9B9	A0A251RPQ9	A0A251U9B9	Putative ribosomal protein S8e family protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.987
A0A251RPQ9	A0A251UCX9	A0A251RPQ9	A0A251UCX9	Putative ribosomal protein S8e family protein.	Putative ftsJ-like methyltransferase family protein.	0.938
A0A251RPQ9	A0A251UEE8	A0A251RPQ9	A0A251UEE8	Putative ribosomal protein S8e family protein.	Uncharacterized protein.	0.968
A0A251RPQ9	A0A251UGQ9	A0A251RPQ9	A0A251UGQ9	Putative ribosomal protein S8e family protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.984