58 items (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSB6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (234 aa)
	PBA1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (237 aa)
	A0A251VDK2	Putative histone H2B; Belongs to the histone H2B family. (138 aa)
	A0A251VPL1	Histone H2B; Belongs to the histone H2B family. (144 aa)
	A0A251VQK7	Putative B30.2/SPRY domain, Concanavalin A-like lectin/glucanase domain protein. (448 aa)
	A0A251VQX3	Histone H2B; Belongs to the histone H2B family. (144 aa)
	A0A251RM95	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (251 aa)
	RS27A	Putative ubiquitin-40S ribosomal protein S27a. (153 aa)
	A0A251S3M6	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (248 aa)
	A0A251SBH9	Histone H2B; Belongs to the histone H2B family. (134 aa)
	A0A251SBX3	Histone H2B; Belongs to the histone H2B family. (141 aa)
	A0A251SDE3	Putative ARM repeat superfamily protein. (526 aa)
	A0A251SFZ0	Histone H2B; Belongs to the histone H2B family. (142 aa)
	A0A251SGU7	Putative phosphatidylinositol 3-and 4-kinase family protein with FAT domain-containing protein; Belongs to the PI3/PI4-kinase family. (3887 aa)
	A0A251SNJ0	Histone H2B; Belongs to the histone H2B family. (173 aa)
	A0A251SS73	Uncharacterized protein. (292 aa)
	A0A251SSV1	Putative histone H2B; Belongs to the histone H2B family. (230 aa)
	A0A251STP7	Histone H2B; Belongs to the histone H2B family. (136 aa)
	A0A251SUL9	Putative phosphotransferases, alcohol group as acceptor; Belongs to the PI3/PI4-kinase family. (3892 aa)
	A0A251SW26	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. (260 aa)
	A0A251T2C4	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein. (153 aa)
	PSB5	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (301 aa)
	A0A251T5S7	Putative cdc73/Parafibromin, Paf1 complex subunit Cdc73 domain protein. (158 aa)
	A0A251T6V1	Putative the fantastic four family. (194 aa)
	ATTERT	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1049 aa)
	PHP	Putative PARAFIBROMIN-like protein. (395 aa)
	PBB2	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (269 aa)
	H2B3	Histone H2B; Belongs to the histone H2B family. (142 aa)
	A0A251TE29	Putative the fantastic four family. (144 aa)
	H2B1	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A0A251TLB9	Putative armadillo-type fold protein. (120 aa)
	A0A251TTB4	Histone H2B; Belongs to the histone H2B family. (166 aa)
	A0A251TUX0	Histone H2B; Belongs to the histone H2B family. (66 aa)
	A0A251TVF7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	A0A251U1U7	Putative nucleophile aminohydrolase (Ntn hydrolases) superfamily protein. (322 aa)
	H2B	Histone H2B; Belongs to the histone H2B family. (137 aa)
	A0A251U3T0	Putative histone H2B; Belongs to the histone H2B family. (66 aa)
	HTB1	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A0A251U6A5	Histone H2B; Belongs to the histone H2B family. (272 aa)
	A0A251U6B0	Putative histone H2B; Belongs to the histone H2B family. (128 aa)
	A0A251U6D9	Putative histone H2B. (107 aa)
	A0A251U736	Histone H2B; Belongs to the histone H2B family. (133 aa)
	A0A251U783	Histone H2B; Belongs to the histone H2B family. (141 aa)
	A0A251UA37	Putative histone H2B; Belongs to the histone H2B family. (119 aa)
	A0A251UC72	Histone H2B; Belongs to the histone H2B family. (175 aa)
	H2B1-2	Histone H2B; Belongs to the histone H2B family. (148 aa)
	A0A251UIE9	Putative proteasome, subunit alpha/beta, nucleophile aminohydrolase. (119 aa)
	A0A251ULH4	Histone H2B; Belongs to the histone H2B family. (120 aa)
	A0A251ULU8	Putative peptidase T1A, proteasome beta-subunit. (114 aa)
	VIP4	Putative leo1-like family protein. (625 aa)
	A0A251UX10	Putative histone H2B; Belongs to the histone H2B family. (134 aa)
	A0A251UYH8	Putative histone H2B; Belongs to the histone H2B family. (85 aa)
	A0A251UZY1	Histone H2B; Belongs to the histone H2B family. (138 aa)
	A0A251V220	Putative S-adenosyl-L-methionine-dependent methyltransferase. (191 aa)
	A0A251V2W8	Putative proteasome inhibitor-related protein. (302 aa)
	A0A251V337	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. (280 aa)
	A0A251V3I2	Putative S-adenosyl-L-methionine-dependent methyltransferase. (267 aa)
	PAD2	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (248 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RM95	A0A251S3M6	A0A251RM95	A0A251S3M6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
A0A251RM95	A0A251SDE3	A0A251RM95	A0A251SDE3	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative ARM repeat superfamily protein.	0.748
A0A251RM95	A0A251T2C4	A0A251RM95	A0A251T2C4	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	0.936
A0A251RM95	A0A251TLB9	A0A251RM95	A0A251TLB9	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative armadillo-type fold protein.	0.748
A0A251RM95	A0A251TVF7	A0A251RM95	A0A251TVF7	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
A0A251RM95	A0A251U1U7	A0A251RM95	A0A251U1U7	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative nucleophile aminohydrolase (Ntn hydrolases) superfamily protein.	0.991
A0A251RM95	A0A251UIE9	A0A251RM95	A0A251UIE9	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative proteasome, subunit alpha/beta, nucleophile aminohydrolase.	0.546
A0A251RM95	A0A251ULU8	A0A251RM95	A0A251ULU8	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative peptidase T1A, proteasome beta-subunit.	0.988
A0A251RM95	A0A251V2W8	A0A251RM95	A0A251V2W8	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative proteasome inhibitor-related protein.	0.900
A0A251RM95	PAD2	A0A251RM95	A0A251V5B7	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
A0A251RM95	PBA1	A0A251RM95	A0A251V8J6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.996
A0A251RM95	PBB2	A0A251RM95	A0A251T975	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.900
A0A251RM95	PSB5	A0A251RM95	A0A251T3E2	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.991
A0A251RM95	PSB6	A0A251RM95	A0A251V6W1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.996
A0A251RM95	RS27A	A0A251RM95	A0A251RZ36	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative ubiquitin-40S ribosomal protein S27a.	0.936
A0A251S3M6	A0A251RM95	A0A251S3M6	A0A251RM95	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.991
A0A251S3M6	A0A251SDE3	A0A251S3M6	A0A251SDE3	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Putative ARM repeat superfamily protein.	0.840
A0A251S3M6	A0A251T2C4	A0A251S3M6	A0A251T2C4	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	0.928
A0A251S3M6	A0A251TLB9	A0A251S3M6	A0A251TLB9	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Putative armadillo-type fold protein.	0.840
A0A251S3M6	A0A251TVF7	A0A251S3M6	A0A251TVF7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.900