23 items (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251T744	Uncharacterized protein. (163 aa)
	A0A251T2C4	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein. (153 aa)
	A0A251SZK5	Putative peptidase M17, leucyl aminopeptidase. (72 aa)
	A0A251SZ61	Putative peptidase M17, leucine aminopeptidase/peptidase B. (133 aa)
	A0A251SYR9	Putative peptidase M17, leucine aminopeptidase/peptidase B. (467 aa)
	A0A251SS97	Putative mammalian uncoordinated homology 13, domain 2. (1010 aa)
	A0A251SQ65	Putative armadillo-type fold protein. (333 aa)
	AMPL2	Putative leucine aminopeptidase 2, chloroplastic. (582 aa)
	A0A251TR19	Putative HAUS augmin-like complex subunit 1. (304 aa)
	A0A251TT89	Putative peptidase M17, leucine aminopeptidase/peptidase B. (584 aa)
	A0A251VCW1	Uncharacterized protein. (254 aa)
	A0A251VFX3	Putative zinc ion binding protein. (780 aa)
	A0A251VMM9	HAUS-augmin3 domain-containing protein. (617 aa)
	A0A251SAM1	Uncharacterized protein. (143 aa)
	A0A251SAL5	Uncharacterized protein. (1199 aa)
	RS27A	Putative ubiquitin-40S ribosomal protein S27a. (153 aa)
	NEDD1	Putative transducin/WD40 repeat-like superfamily protein. (761 aa)
	A0A251UHY5	Uncharacterized protein. (304 aa)
	A0A251ULL5	Putative HAUS augmin-like complex subunit 4. (405 aa)
	MOR1	Putative ARM repeat superfamily protein. (2014 aa)
	AMPL2-2	Putative leucine aminopeptidase 2, chloroplastic. (581 aa)
	A0A251V8E8	Uncharacterized protein. (423 aa)
	A0A251TG27	Uncharacterized protein. (1211 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251SAL5	A0A251VCW1	A0A251SAL5	A0A251VCW1	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A251SAM1	A0A251VCW1	A0A251SAM1	A0A251VCW1	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A251SQ65	A0A251VCW1	A0A251SQ65	A0A251VCW1	Putative armadillo-type fold protein.	Uncharacterized protein.	0.668
A0A251SS97	A0A251VCW1	A0A251SS97	A0A251VCW1	Putative mammalian uncoordinated homology 13, domain 2.	Uncharacterized protein.	0.668
A0A251SZ61	A0A251SZK5	A0A251SZ61	A0A251SZK5	Putative peptidase M17, leucine aminopeptidase/peptidase B.	Putative peptidase M17, leucyl aminopeptidase.	0.534
A0A251SZK5	A0A251SZ61	A0A251SZK5	A0A251SZ61	Putative peptidase M17, leucyl aminopeptidase.	Putative peptidase M17, leucine aminopeptidase/peptidase B.	0.534
A0A251T2C4	A0A251VCW1	A0A251T2C4	A0A251VCW1	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	Uncharacterized protein.	0.591
A0A251T2C4	A0A251VFX3	A0A251T2C4	A0A251VFX3	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	Putative zinc ion binding protein.	0.870
A0A251T2C4	RS27A	A0A251T2C4	A0A251RZ36	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	Putative ubiquitin-40S ribosomal protein S27a.	0.900
A0A251T744	A0A251VCW1	A0A251T744	A0A251VCW1	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A251TG27	A0A251VCW1	A0A251TG27	A0A251VCW1	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A251TR19	A0A251ULL5	A0A251TR19	A0A251ULL5	Putative HAUS augmin-like complex subunit 1.	Putative HAUS augmin-like complex subunit 4.	0.845
A0A251TR19	A0A251V8E8	A0A251TR19	A0A251V8E8	Putative HAUS augmin-like complex subunit 1.	Uncharacterized protein.	0.842
A0A251TR19	A0A251VMM9	A0A251TR19	A0A251VMM9	Putative HAUS augmin-like complex subunit 1.	HAUS-augmin3 domain-containing protein.	0.993
A0A251TR19	NEDD1	A0A251TR19	A0A251U5D1	Putative HAUS augmin-like complex subunit 1.	Putative transducin/WD40 repeat-like superfamily protein.	0.803
A0A251TT89	AMPL2	A0A251TT89	A0A251TQC4	Putative peptidase M17, leucine aminopeptidase/peptidase B.	Putative leucine aminopeptidase 2, chloroplastic.	0.901
A0A251TT89	AMPL2-2	A0A251TT89	A0A251V5D0	Putative peptidase M17, leucine aminopeptidase/peptidase B.	Putative leucine aminopeptidase 2, chloroplastic.	0.901
A0A251UHY5	A0A251ULL5	A0A251UHY5	A0A251ULL5	Uncharacterized protein.	Putative HAUS augmin-like complex subunit 4.	0.843
A0A251UHY5	A0A251V8E8	A0A251UHY5	A0A251V8E8	Uncharacterized protein.	Uncharacterized protein.	0.844
A0A251UHY5	A0A251VMM9	A0A251UHY5	A0A251VMM9	Uncharacterized protein.	HAUS-augmin3 domain-containing protein.	0.993