80 items (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251SJN2	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily. (408 aa)
	A0A251SLW6	Putative polycomb protein, VEFS-Box. (569 aa)
	A0A251SLZ1	Putative polycomb protein, VEFS-Box. (632 aa)
	A0A251SMD2	Putative RNA polymerase sigma-70 like domain-containing protein. (346 aa)
	A0A251SMK1	Uncharacterized protein. (312 aa)
	A0A251SNH7	Putative polycomb protein, VEFS-Box. (720 aa)
	SIGF	Putative RNApolymerase sigma-subunit F. (566 aa)
	A0A251STR9	Putative armadillo-type fold, Proteasome activator Blm10, mid region. (1798 aa)
	A0A251T2C4	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein. (153 aa)
	A0A251T2E7	Putative zinc finger, RING/FYVE/PHD-type. (255 aa)
	PSB5	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (301 aa)
	PBB2	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (269 aa)
	FIE2	Putative polycomb group protein FIE2. (370 aa)
	GUFP	Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (726 aa)
	CKB1	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (289 aa)
	RAPTOR1B	Putative regulatory-associated protein of TOR1. (1397 aa)
	A0A251TIW9	Putative regulatory associated protein of TOR. (396 aa)
	A0A251TKE7	Putative elongation factor family protein. (677 aa)
	A0A251TLB9	Putative armadillo-type fold protein. (120 aa)
	A0A251TNK9	Uncharacterized protein. (127 aa)
	A0A251TT99	Putative WD40/YVTN repeat-like-containing domain-containing protein. (181 aa)
	A0A251TTR8	Putative zinc finger, RING/FYVE/PHD-type. (247 aa)
	A0A251TTW1	Uncharacterized protein. (91 aa)
	A0A251TVF7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	PSA1	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (295 aa)
	GUF1	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (662 aa)
	A0A251U1U7	Putative nucleophile aminohydrolase (Ntn hydrolases) superfamily protein. (322 aa)
	A0A251U1V0	Uncharacterized protein. (186 aa)
	A0A251U1X4	Putative RING/U-box superfamily protein. (255 aa)
	A0A251U3C0	Repressor of RNA polymerase III transcription. (224 aa)
	EMF2	Putative VEFS-Box of polycomb protein. (662 aa)
	A0A251U7J6	Putative zinc finger, RING/FYVE/PHD-type. (176 aa)
	A0A251U9L0	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (996 aa)
	MAF1-2	Repressor of RNA polymerase III transcription. (224 aa)
	SIGE	Putative sigma factor E. (506 aa)
	A0A251UFP4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (288 aa)
	A0A251UG38	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (270 aa)
	A0A251UGH5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (419 aa)
	A0A251UGH7	Uncharacterized protein. (79 aa)
	A0A251UIE9	Putative proteasome, subunit alpha/beta, nucleophile aminohydrolase. (119 aa)
	A0A251ULU8	Putative peptidase T1A, proteasome beta-subunit. (114 aa)
	A0A251UQJ2	Uncharacterized protein. (79 aa)
	A0A251UYI5	Putative polycomb protein, VEFS-Box. (187 aa)
	A0A251UYP9	Putative zinc finger, RING/FYVE/PHD-type. (244 aa)
	A0A251UYQ2	Putative polycomb protein, VEFS-Box. (595 aa)
	A0A251V087	Putative RNA polymerase sigma-70 region 1.2. (592 aa)
	ATRING1A	Putative RING 1A. (509 aa)
	A0A251V2W8	Putative proteasome inhibitor-related protein. (302 aa)
	A0A251V3B0	Putative zinc finger, RING/FYVE/PHD-type. (224 aa)
	PAD2	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (248 aa)
	PSB6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (234 aa)
	PA200	Putative proteasome activating protein. (1813 aa)
	PBA1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (237 aa)
	A0A251VJ51	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (996 aa)
	A0A251VKM0	Putative zinc finger, RING/FYVE/PHD-type. (386 aa)
	A0A251VMH7	Putative zinc finger, RING/FYVE/PHD-type. (231 aa)
	C3H69	Putative zinc finger CCCH domain-containing protein 69. (354 aa)
	A0A251VQ49	Putative RNA polymerase sigma-70 like domain, RNA polymerase sigma factor, SigB/C/D/F, plastid. (610 aa)
	CKB4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (274 aa)
	A0A251RLK5	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (274 aa)
	A0A251RM95	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (251 aa)
	A0A251RQY3	Putative elongation factor family protein. (660 aa)
	A0A251RRP3	Putative regulatory associated protein of TOR. (101 aa)
	A0A251RS49	Uncharacterized protein. (72 aa)
	A0A251RU35	Uncharacterized protein. (63 aa)
	PAF1	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (274 aa)
	A0A251RW76	Putative zinc finger, RING/FYVE/PHD-type. (357 aa)
	A0A251RWL2	Putative zinc finger, RING/FYVE/PHD-type. (211 aa)
	A0A251RXW5	Uncharacterized protein. (74 aa)
	A0A251RYM9	Putative zinc finger, RING/FYVE/PHD-type. (241 aa)
	RS27A	Putative ubiquitin-40S ribosomal protein S27a. (153 aa)
	A0A251S0U4	Putative zinc finger, RING/FYVE/PHD-type. (247 aa)
	CKB3	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (275 aa)
	A0A251S1P9	Putative transducin/WD40 repeat-like superfamily protein. (320 aa)
	A0A251S3M6	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (248 aa)
	RAPTOR1A	Putative HEAT/WD domain containing protein. (1409 aa)
	RING1B	Putative RING 1B. (451 aa)
	EEDA	Putative polycomb protein eed-A. (364 aa)
	A0A251SDE3	Putative ARM repeat superfamily protein. (526 aa)
	CKA2	Putative casein kinase II, alpha chain 2; Belongs to the protein kinase superfamily. (412 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RLK5	A0A251SJN2	A0A251RLK5	A0A251SJN2	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.886
A0A251RLK5	A0A251TTW1	A0A251RLK5	A0A251TTW1	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.945
A0A251RLK5	A0A251UFP4	A0A251RLK5	A0A251UFP4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.548
A0A251RLK5	A0A251UG38	A0A251RLK5	A0A251UG38	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.544
A0A251RLK5	A0A251UGH5	A0A251RLK5	A0A251UGH5	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.886
A0A251RLK5	A0A251VKM0	A0A251RLK5	A0A251VKM0	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Putative zinc finger, RING/FYVE/PHD-type.	0.470
A0A251RLK5	ATRING1A	A0A251RLK5	A0A251V1S9	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Putative RING 1A.	0.470
A0A251RLK5	CKA2	A0A251RLK5	A0A251SGY9	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Putative casein kinase II, alpha chain 2; Belongs to the protein kinase superfamily.	0.945
A0A251RLK5	CKB1	A0A251RLK5	A0A251TBV9	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.547
A0A251RLK5	CKB3	A0A251RLK5	A0A251S104	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.546
A0A251RLK5	CKB4	A0A251RLK5	A0A251VQ85	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.547
A0A251RLK5	RING1B	A0A251RLK5	A0A251S9C6	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Putative RING 1B.	0.470
A0A251RM95	A0A251RU35	A0A251RM95	A0A251RU35	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.908
A0A251RM95	A0A251S3M6	A0A251RM95	A0A251S3M6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
A0A251RM95	A0A251SDE3	A0A251RM95	A0A251SDE3	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative ARM repeat superfamily protein.	0.748
A0A251RM95	A0A251SMK1	A0A251RM95	A0A251SMK1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.948
A0A251RM95	A0A251STR9	A0A251RM95	A0A251STR9	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative armadillo-type fold, Proteasome activator Blm10, mid region.	0.908
A0A251RM95	A0A251T2C4	A0A251RM95	A0A251T2C4	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.	0.936
A0A251RM95	A0A251TLB9	A0A251RM95	A0A251TLB9	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Putative armadillo-type fold protein.	0.748
A0A251RM95	A0A251TNK9	A0A251RM95	A0A251TNK9	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.948