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PSBB-2 PSBB-2 matK-3 matK-3 psbA psbA ycf1 ycf1 psaC psaC PSBA PSBA ATPB ATPB ClpP ClpP PSBA-2 PSBA-2 psbD-2 psbD-2 cbbL cbbL ndhF ndhF psbH psbH Rps12 Rps12 matK matK ndhD ndhD Rps12-2 Rps12-2 rpoB rpoB PSAC PSAC Ycf1 Ycf1 TRNH TRNH YCF4 YCF4 matK-2 matK-2 PSBH PSBH PSBB PSBB ACCD ACCD CLPP CLPP ACCD-2 ACCD-2 PSAC-2 PSAC-2 PSBH-2 PSBH-2 ACCD-3 ACCD-3 ATPB-2 ATPB-2 PSBB-3 PSBB-3 accD accD ndhC ndhC lhbA lhbA ycf4 ycf4 rps18 rps18 psbB psbB rpl32 rpl32
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
PSBB-2Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. (487 aa)
matK-3Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (500 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
ycf1Hypothetical chloroplast RF19. (194 aa)
psaCPhotosystem I iron-sulfur center. (81 aa)
PSBAPhotosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (322 aa)
ATPBPutative ATP synthase subunit beta protein. (528 aa)
ClpPATP-dependent Clp protease proteolytic subunit. (196 aa)
PSBA-2Photosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (340 aa)
psbD-2Photosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (793 aa)
cbbLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (492 aa)
ndhFPutative NADH-plastoquinone oxidoreductase, chain 5; Belongs to the complex I subunit 5 family. (743 aa)
psbHPhotosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (79 aa)
Rps12NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (244 aa)
matKMaturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (487 aa)
ndhDNAD(P)H-quinone oxidoreductase chain 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (709 aa)
Rps12-2Putative ribosomal protein S12/S23. (142 aa)
rpoBDNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (3147 aa)
PSACPutative photosystem I iron-sulfur center. (85 aa)
Ycf1Uncharacterized protein. (1521 aa)
TRNHPutative tropinone reductase. (275 aa)
YCF4Putative photosystem I assembly protein Ycf4. (178 aa)
matK-2Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (447 aa)
PSBHPutative photosystem II reaction center protein H. (79 aa)
PSBBPutative photosystem II CP47 reaction center protein. (415 aa)
ACCDPutative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta protein. (419 aa)
CLPPATP-dependent Clp protease proteolytic subunit. (178 aa)
ACCD-2Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta protein. (322 aa)
PSAC-2Putative photosystem I iron-sulfur center. (72 aa)
PSBH-2Putative photosystem II reaction center protein H. (79 aa)
ACCD-3Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta protein. (336 aa)
ATPB-2Putative ATP synthase subunit beta protein. (377 aa)
PSBB-3Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. (492 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (480 aa)
ndhCNADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (120 aa)
lhbAPhotosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
ycf4Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family. (184 aa)
rps18Putative ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family. (101 aa)
psbBPhotosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (508 aa)
rpl32Putative 50S ribosomal protein L32 protein. (54 aa)
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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