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cemA cemA CEMA CEMA GC1 GC1 matK-2 matK-2 CLPP CLPP ATPB-2 ATPB-2 matK-3 matK-3 psbA psbA ccsA ccsA rpl32 rpl32 ycf1 ycf1 CCSA CCSA PSBA PSBA ATPB ATPB ClpP ClpP PSBA-2 PSBA-2 cbbL cbbL ndhF ndhF AtpF AtpF Rps12 Rps12 matK matK ndhD ndhD ycf3 ycf3 Rps12-2 Rps12-2 rpoB rpoB Ycf1 Ycf1 CCSA-2 CCSA-2 lhbA lhbA rps14 rps14 TRNH TRNH psbE psbE
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cemAPutative chloroplast envelope membrane protein, CemA; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake. (229 aa)
CEMAPutative chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake. (229 aa)
GC1Putative golgin candidate 1. (729 aa)
matK-2Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (447 aa)
CLPPATP-dependent Clp protease proteolytic subunit. (178 aa)
ATPB-2Putative ATP synthase subunit beta protein. (377 aa)
matK-3Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (500 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
ccsACytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (322 aa)
rpl32Putative 50S ribosomal protein L32 protein. (54 aa)
ycf1Hypothetical chloroplast RF19. (194 aa)
CCSAPutative cytochrome c biogenesis protein CcsA. (259 aa)
PSBAPhotosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (322 aa)
ATPBPutative ATP synthase subunit beta protein. (528 aa)
ClpPATP-dependent Clp protease proteolytic subunit. (196 aa)
PSBA-2Photosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (340 aa)
cbbLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (492 aa)
ndhFPutative NADH-plastoquinone oxidoreductase, chain 5; Belongs to the complex I subunit 5 family. (743 aa)
AtpFPutative ATPase, F0 complex, subunit B/B' protein; Belongs to the ATPase alpha/beta chains family. (658 aa)
Rps12NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (244 aa)
matKMaturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (487 aa)
ndhDNAD(P)H-quinone oxidoreductase chain 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (709 aa)
ycf3Photosystem I P700 chlorophyll a apoprotein A1; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits; Belongs to the PsaA/PsaB family. (1630 aa)
Rps12-2Putative ribosomal protein S12/S23. (142 aa)
rpoBDNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (3147 aa)
Ycf1Uncharacterized protein. (1521 aa)
CCSA-2Putative cytochrome c biogenesis protein CcsA. (265 aa)
lhbAPhotosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
rps14Putative ribosomal protein S14. (100 aa)
TRNHPutative tropinone reductase. (275 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (83 aa)
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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