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rpl16 rpl16 psbE psbE petD petD ycf1 ycf1 PSBA PSBA ClpP ClpP Rpl2 Rpl2 PSBA-2 PSBA-2 CYB6-2 CYB6-2 AtpF AtpF NU2C1-2 NU2C1-2 Rpl16 Rpl16 matK matK rpoB rpoB Ycf1 Ycf1 TRNH TRNH matK-2 matK-2 RpoC1 RpoC1 PETD PETD CLPP CLPP PETD-2 PETD-2 Rps19 Rps19 NdhA NdhA matK-3 matK-3 psbA psbA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rpl16Putative ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (83 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (174 aa)
ycf1Hypothetical chloroplast RF19. (194 aa)
PSBAPhotosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (322 aa)
ClpPATP-dependent Clp protease proteolytic subunit. (196 aa)
Rpl2Putative ribosomal protein L2, Ribosomal protein L25/L23. (290 aa)
PSBA-2Photosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. (340 aa)
CYB6-2Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (238 aa)
AtpFPutative ATPase, F0 complex, subunit B/B' protein; Belongs to the ATPase alpha/beta chains family. (658 aa)
NU2C1-2NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (521 aa)
Rpl16Putative ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (119 aa)
matKMaturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (487 aa)
rpoBDNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (3147 aa)
Ycf1Uncharacterized protein. (1521 aa)
TRNHPutative tropinone reductase. (275 aa)
matK-2Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (447 aa)
RpoC1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2020 aa)
PETDPutative cytochrome b6-f complex subunit 4. (174 aa)
CLPPATP-dependent Clp protease proteolytic subunit. (178 aa)
PETD-2Putative cytochrome b6-f complex subunit 4. (148 aa)
Rps19Putative ribosomal protein L2, Ribosomal protein S19/S15, Ribosomal protein S19, superfamily; Belongs to the universal ribosomal protein uS19 family. (226 aa)
NdhAPutative ribosomal protein S15. (822 aa)
matK-3Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (500 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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