(22 nodes) (2023) NAD+ Precursors Nicotinamide Mononucleotide (NMN) and Nicotinamide Riboside (NR): Potential Dietary Contribution to Health. network (Helianthus annuus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASP5	Aspartate aminotransferase. (513 aa)
	ATNUDT19	Putative nudix hydrolase. (416 aa)
	A0A251T4W7	Histone H3; Belongs to the histone H3 family. (147 aa)
	A0A251TEH2	Histone H3; Belongs to the histone H3 family. (140 aa)
	ASP3	Aspartate aminotransferase. (445 aa)
	A0A251VBX2	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A251VRV6	Aspartate aminotransferase. (501 aa)
	A0A251ULQ3	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein. (402 aa)
	H32	Putative histone H3 type 2. (133 aa)
	H3	Putative histone H3. (133 aa)
	H3-2	Histone H3; Belongs to the histone H3 family. (133 aa)
	A0A251SZ13	Aspartate aminotransferase. (419 aa)
	A0A251SSA9	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A251SRW3	Aspartate aminotransferase. (496 aa)
	H33-2	Putative histone H3.3. (146 aa)
	A0A251SAQ0	Putative histone H3/CENP-A. (213 aa)
	H33	Putative histone H3.3. (143 aa)
	A0A251S9Y5	Histone H3; Belongs to the histone H3 family. (136 aa)
	ASP1	Aspartate aminotransferase. (421 aa)
	A0A251US63	Putative histone H3/CENP-A. (133 aa)
	A0A251V082	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A251V3T5	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein; Belongs to the Nudix hydrolase family. (391 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251SRW3	A0A251SZ13	A0A251SRW3	A0A251SZ13	Aspartate aminotransferase.	Aspartate aminotransferase.	0.656
A0A251SRW3	A0A251VRV6	A0A251SRW3	A0A251VRV6	Aspartate aminotransferase.	Aspartate aminotransferase.	0.634
A0A251SRW3	ASP1	A0A251SRW3	A0A251RTQ7	Aspartate aminotransferase.	Aspartate aminotransferase.	0.629
A0A251SRW3	ASP3	A0A251SRW3	A0A251U954	Aspartate aminotransferase.	Aspartate aminotransferase.	0.655
A0A251SRW3	ASP5	A0A251SRW3	A0A251VHR4	Aspartate aminotransferase.	Aspartate aminotransferase.	0.900
A0A251SZ13	A0A251SRW3	A0A251SZ13	A0A251SRW3	Aspartate aminotransferase.	Aspartate aminotransferase.	0.656
A0A251SZ13	A0A251VRV6	A0A251SZ13	A0A251VRV6	Aspartate aminotransferase.	Aspartate aminotransferase.	0.621
A0A251SZ13	ASP1	A0A251SZ13	A0A251RTQ7	Aspartate aminotransferase.	Aspartate aminotransferase.	0.621
A0A251SZ13	ASP3	A0A251SZ13	A0A251U954	Aspartate aminotransferase.	Aspartate aminotransferase.	0.901
A0A251SZ13	ASP5	A0A251SZ13	A0A251VHR4	Aspartate aminotransferase.	Aspartate aminotransferase.	0.656
A0A251ULQ3	A0A251V3T5	A0A251ULQ3	A0A251V3T5	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein.	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein; Belongs to the Nudix hydrolase family.	0.901
A0A251ULQ3	ATNUDT19	A0A251ULQ3	A0A251T264	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein.	Putative nudix hydrolase.	0.900
A0A251V3T5	A0A251ULQ3	A0A251V3T5	A0A251ULQ3	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein; Belongs to the Nudix hydrolase family.	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein.	0.901
A0A251V3T5	ATNUDT19	A0A251V3T5	A0A251T264	Putative NADH pyrophosphatase-like, NUDIX hydrolase domain-like protein; Belongs to the Nudix hydrolase family.	Putative nudix hydrolase.	0.901
A0A251VRV6	A0A251SRW3	A0A251VRV6	A0A251SRW3	Aspartate aminotransferase.	Aspartate aminotransferase.	0.634
A0A251VRV6	A0A251SZ13	A0A251VRV6	A0A251SZ13	Aspartate aminotransferase.	Aspartate aminotransferase.	0.621
A0A251VRV6	ASP1	A0A251VRV6	A0A251RTQ7	Aspartate aminotransferase.	Aspartate aminotransferase.	0.602
A0A251VRV6	ASP3	A0A251VRV6	A0A251U954	Aspartate aminotransferase.	Aspartate aminotransferase.	0.621
A0A251VRV6	ASP5	A0A251VRV6	A0A251VHR4	Aspartate aminotransferase.	Aspartate aminotransferase.	0.635
ASP1	A0A251SRW3	A0A251RTQ7	A0A251SRW3	Aspartate aminotransferase.	Aspartate aminotransferase.	0.629