(16 nodes) (2023) Evaluation of the Protective and Regenerative Properties of Commercially Available Artichoke Leaf Powder Extract on Plasma and Liver Oxidative Stress Parameters. network (Helianthus annuus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A251SRW3	Aspartate aminotransferase. (496 aa)
	A6XIG5_HELAN	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (228 aa)
	A0A251VRV6	Aspartate aminotransferase. (501 aa)
	ASP5	Aspartate aminotransferase. (513 aa)
	ASP3	Aspartate aminotransferase. (445 aa)
	A0A251U844	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (212 aa)
	A0A251U3C3	3-hydroxy-3-methylglutaryl coenzyme A reductase. (590 aa)
	A0A251TUX7	3-hydroxy-3-methylglutaryl coenzyme A reductase. (572 aa)
	A0A251SZ13	Aspartate aminotransferase. (419 aa)
	HMDH2	3-hydroxy-3-methylglutaryl coenzyme A reductase. (559 aa)
	HMDH	3-hydroxy-3-methylglutaryl coenzyme A reductase. (517 aa)
	ASP1	Aspartate aminotransferase. (421 aa)
	HMDH1	3-hydroxy-3-methylglutaryl coenzyme A reductase. (595 aa)
	HMDH2-2	3-hydroxy-3-methylglutaryl coenzyme A reductase. (597 aa)
	A0A251SEU9	Putative calcineurin-like metallo-phosphoesterase superfamily protein. (449 aa)
	A0A251SMA1	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (226 aa)

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251SEU9	A0A251SRW3	A0A251SEU9	A0A251SRW3	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.416
A0A251SEU9	A0A251SZ13	A0A251SEU9	A0A251SZ13	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.611
A0A251SEU9	A0A251VRV6	A0A251SEU9	A0A251VRV6	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.643
A0A251SEU9	ASP1	A0A251SEU9	A0A251RTQ7	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.643
A0A251SEU9	ASP3	A0A251SEU9	A0A251U954	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.611
A0A251SEU9	ASP5	A0A251SEU9	A0A251VHR4	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	Aspartate aminotransferase.	0.406
A0A251SMA1	A0A251U844	A0A251SMA1	A0A251U844	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.909
A0A251SMA1	A6XIG5_HELAN	A0A251SMA1	A6XIG5	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.900
A0A251SRW3	A0A251SEU9	A0A251SRW3	A0A251SEU9	Aspartate aminotransferase.	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	0.416
A0A251SRW3	A0A251SZ13	A0A251SRW3	A0A251SZ13	Aspartate aminotransferase.	Aspartate aminotransferase.	0.656
A0A251SRW3	A0A251U3C3	A0A251SRW3	A0A251U3C3	Aspartate aminotransferase.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.408
A0A251SRW3	A0A251VRV6	A0A251SRW3	A0A251VRV6	Aspartate aminotransferase.	Aspartate aminotransferase.	0.634
A0A251SRW3	ASP1	A0A251SRW3	A0A251RTQ7	Aspartate aminotransferase.	Aspartate aminotransferase.	0.629
A0A251SRW3	ASP3	A0A251SRW3	A0A251U954	Aspartate aminotransferase.	Aspartate aminotransferase.	0.655
A0A251SRW3	ASP5	A0A251SRW3	A0A251VHR4	Aspartate aminotransferase.	Aspartate aminotransferase.	0.900
A0A251SZ13	A0A251SEU9	A0A251SZ13	A0A251SEU9	Aspartate aminotransferase.	Putative calcineurin-like metallo-phosphoesterase superfamily protein.	0.611
A0A251SZ13	A0A251SRW3	A0A251SZ13	A0A251SRW3	Aspartate aminotransferase.	Aspartate aminotransferase.	0.656
A0A251SZ13	A0A251TUX7	A0A251SZ13	A0A251TUX7	Aspartate aminotransferase.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.420
A0A251SZ13	A0A251U3C3	A0A251SZ13	A0A251U3C3	Aspartate aminotransferase.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.420
A0A251SZ13	A0A251VRV6	A0A251SZ13	A0A251VRV6	Aspartate aminotransferase.	Aspartate aminotransferase.	0.621