STRINGSTRING
Ssed_0721 Ssed_0721 Ssed_0722 Ssed_0722 Ssed_0723 Ssed_0723 Ssed_0724 Ssed_0724 Ssed_0725 Ssed_0725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0721Magnesium transporter; Acts as a magnesium transporter. (454 aa)
Ssed_0722KEGG: son:SO3965 phosphocarrier protein NPR. (91 aa)
Ssed_0723Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. (282 aa)
Ssed_0724KEGG: slo:Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN. (147 aa)
Ssed_0725KEGG: slo:Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA. (95 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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