STRINGSTRING
Ssed_0913 Ssed_0913 Ssed_0948 Ssed_0948 pepA pepA gshA gshA Ssed_1488 Ssed_1488 Ssed_2482 Ssed_2482 Ssed_2689 Ssed_2689 Ssed_2691 Ssed_2691 Ssed_3420 Ssed_3420 Ssed_3421 Ssed_3421 Ssed_3897 Ssed_3897 gshB gshB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0913KEGG: she:Shewmr4_3040 aminopeptidase N. (879 aa)
Ssed_0948KEGG: shw:Sputw3181_0717 gamma-glutamyltransferase. (563 aa)
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (502 aa)
gshAKEGG: slo:Shew_1227 glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (544 aa)
Ssed_1488KEGG: slo:Shew_1677 leucyl aminopeptidase; Belongs to the peptidase M17 family. (453 aa)
Ssed_2482KEGG: slo:Shew_1803 aminopeptidase N. (855 aa)
Ssed_2689KEGG: she:Shewmr4_2297 gamma-glutamyltransferase. (582 aa)
Ssed_2691KEGG: she:Shewmr4_2301 dipeptidase, putative. (534 aa)
Ssed_3420KEGG: she:Shewmr4_0949 peptidase M17, leucyl aminopeptidase domain protein; Belongs to the peptidase M17 family. (511 aa)
Ssed_3421Xaa-His dipeptidase; KEGG: slo:Shew_2852 aminoacyl-histidine dipeptidase. (486 aa)
Ssed_3897PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. (425 aa)
gshBKEGG: slo:Shew_3225 glutathione synthetase; Belongs to the prokaryotic GSH synthase family. (316 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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