STRINGSTRING
Ssed_0148 Ssed_0148 Ssed_0154 Ssed_0154 Ssed_0944 Ssed_0944 Ssed_2661 Ssed_2661 Ssed_3298 Ssed_3298 Ssed_3513 Ssed_3513 Ssed_3753 Ssed_3753
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ssed_0148KEGG: slo:Shew_0027 glutathione S-transferase, N-terminal domain. (216 aa)
Ssed_0154KEGG: sfr:Sfri_2500 glutathione S-transferase, C-terminal domain protein. (225 aa)
Ssed_0944KEGG: slo:Shew_0859 glutathione S-transferase, N-terminal domain. (197 aa)
Ssed_2661KEGG: slo:Shew_1780 glutathione S-transferase, N-terminal domain. (219 aa)
Ssed_3298KEGG: slo:Shew_2741 glutathione peroxidase; Belongs to the glutathione peroxidase family. (161 aa)
Ssed_3513KEGG: slo:Shew_2968 glutathione S-transferase, N-terminal domain; Belongs to the GST superfamily. (207 aa)
Ssed_3753KEGG: ppr:PBPRA1656 putative glutathione S-transferase. (217 aa)
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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